PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM82484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 451aa MW: 51598.2 Da PI: 6.4697 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 75.5 | 8.4e-24 | 95 | 192 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li a+ +++++++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++ ++ OWM82484.1 95 KWTDTMVRLLIMAVFYIGDEVGSEPndpkkksggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQGLLETMD 192 7**************999999976445667889999**********************************************5599999999998886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 451 aa Download sequence |
MFSGMGSGML GLEMPPHQTP SNAQNPNSLQ HPQIVGFDPH HSQSQQIKPT GYQYSSSKSK 60 QQLTLSEDDE HDDNSAGDPK KSGNNSKSSP WQRMKWTDTM VRLLIMAVFY IGDEVGSEPN 120 DPKKKSGGLL QKKGKWKSVS RAMMEKGFYV SPQQCEDKFN DLNKRYKRVN DILGKGTACR 180 VVENQGLLET MDLSPKMKEE VKKLLNSKHL FFREMCAYHT SCGHGVAPGG SSGAHNSPEQ 240 HQQQQQQRCP HGATENHLPM GEKDIPSRAE ADSSKVAGRG GSGEEEYDDD EDDDSEDGEN 300 DDDDEDVQED HEHENDVWNL NHPRKRPRKF SYSPSPAVVQ QLNGEVLGII QDSVRSPWEK 360 KQWVKGKLLQ LEEQQVRYRG EAYELERQRL KWLKFSVKKE REMERAKLEN ERRMLENQRL 420 VLLLRQRELE LLDPQQHQHQ QNSSNKRSDP S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10040.1 | 9e-66 | Trihelix family protein |