PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82435.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family E2F/DP
Protein Properties Length: 331aa    MW: 36274.3 Da    PI: 6.6097
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.42.2e-27107189271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr+++++   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  OWM82435.1 107 SGRGLRQFSMR---VCEKVESkGRTTYNEVADELVAEfadpcnslttpdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 189
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MSSQQEDGDK TPAVVAVMAS ASATASRGGG ATRSWGTTVS GQSVSTSGSA GSPSSRSEPT  60
MAATPASDST FLRINHLDTQ GDDSGSQGAA DKKKKRGQRA AAGADKSGRG LRQFSMRVCE  120
KVESKGRTTY NEVADELVAE FADPCNSLTT PDQQQYDEKN IRRRVYDALN VLMAMDIISK  180
DKKEIQWKGL PRTSQNDIEE LKRDRHRIRN SIEKKAAYLQ ELEEQTRPHA TVEVEISEDM  240
QLVHFDFSST PFELHDDNYV LKAMQLCGRP QSDEPPQRFP EDRGVDPSIP DVVYQPQHVP  300
HPIASAAAPS RPPTSPPPVP GILKARVKHE H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-100E2F/DP family protein