PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82366.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 476aa MW: 52008.7 Da PI: 9.4771

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.8e-33	196	252	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k OWM82366.1 196 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 252 9*************************************.*************85 PP
2	WRKY	103.6	1.1e-32	395	452	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver ++dp ++++tYeg+Hnhe OWM82366.1 395 GDGFRWRKYGQKVVKGNPYPRSYYRCTSLKCNVRKHVERVSDDPGAFITTYEGRHNHE 452 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MEIKEAERTV VAKPVASRPS SSSFRSFSEL LAGAIDASPS NPGNEMAVTA IRPKTVRFKS 60 TVNRAPPPPA LVVASGQAET LGTATYNSAK DATMKSDSRR TVVYKPLAKV VSKSTVSLLA 120 NMGNFNVAHQ QGPAPPETRV RNQTVEKTSS RSQYSLNPQQ PIPPPAEHSQ TISEPTKVDD 180 PKILSSSANV DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSFDGQIA 240 EIVYKGEHNH PKPQPPKRSS SGPQEVGTTT QEAAKPNVQV EERNEGLDVR IENNQDSEKG 300 VLAQTNSYRG KGLQGKDPAG IWIVSNNART GTPDNSCGLS GECEDGSKGM EVEDDEPRSK 360 RRKSENPSAE AGISADGTQE SRVVVQNSAE PEIVGDGFRW RKYGQKVVKG NPYPRSYYRC 420 TSLKCNVRKH VERVSDDPGA FITTYEGRHN HEMPLRGSNA AGLEQDPQAA TSKDNP

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MEIKEAERTV VAKPVASRPS SSSFRSFSEL LAGAIDASPS NPGNEMAVTA IRPKTVRFKS  60
TVNRAPPPPA LVVASGQAET LGTATYNSAK DATMKSDSRR TVVYKPLAKV VSKSTVSLLA  120
NMGNFNVAHQ QGPAPPETRV RNQTVEKTSS RSQYSLNPQQ PIPPPAEHSQ TISEPTKVDD  180
PKILSSSANV DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSFDGQIA  240
EIVYKGEHNH PKPQPPKRSS SGPQEVGTTT QEAAKPNVQV EERNEGLDVR IENNQDSEKG  300
VLAQTNSYRG KGLQGKDPAG IWIVSNNART GTPDNSCGLS GECEDGSKGM EVEDDEPRSK  360
RRKSENPSAE AGISADGTQE SRVVVQNSAE PEIVGDGFRW RKYGQKVVKG NPYPRSYYRC  420
TSLKCNVRKH VERVSDDPGA FITTYEGRHN HEMPLRGSNA AGLEQDPQAA TSKDNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-102	WRKY family protein