PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82307.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 552aa MW: 60494.4 Da PI: 7.7808

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l OWM82307.1 59 KGGWTPEEDETLRTAVETYKGKNWKRIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	63.5	4.2e-20	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++vk++G+ W++Ia+ ++ gR +kqc++rw+++l OWM82307.1 111 KGPWTQEEDDKIIELVKKYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	55.2	1.6e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l++a++ +G++ W+ Ia+ ++ gRt++ +k++w++ OWM82307.1 163 KDAWTLEEELALLNAHRVHGNR-WAEIAKVLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MAESNMEDTC LENKQSTAAS GSSLSEGSGS PTVKSPGVSS PVTNSPSHRR TSGPIRRAKG 60 GWTPEEDETL RTAVETYKGK NWKRIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KIIELVKKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALLNAHRV 180 HGNRWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFYLATGK LPPAAKSGLQ NGSNDLNRPA 240 IAKRLIASSK KGSDLAPQAL SRTDDVGNLE DKDQIESLAP PQDGCASSSI AANESAASEG 300 AESKVDASSI ELSSHLESFP KLDSSRIVGE NGEHGGLGTP LQSASLRYGY LCYEPPYVPL 360 DSDLMNGHFI PQSNRDSPGC SPSSFFTPPS ANRGSFNMRS PESILRLAAL SFPNTPSIFR 420 KRKAQTHKDV PPCKLMKADA DLVKSRVDDS DDRERCKESL EKYGSLDEQD SPTHHSNGAI 480 SPDGNAFNAS PPYRLRSKRT AVFKSVEKQL QFTNEEEKLG SDNTKSASNL SAKESDQCTE 540 DTSLGPTKMG VT

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MAESNMEDTC LENKQSTAAS GSSLSEGSGS PTVKSPGVSS PVTNSPSHRR TSGPIRRAKG  60
GWTPEEDETL RTAVETYKGK NWKRIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD  120
KIIELVKKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALLNAHRV  180
HGNRWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFYLATGK LPPAAKSGLQ NGSNDLNRPA  240
IAKRLIASSK KGSDLAPQAL SRTDDVGNLE DKDQIESLAP PQDGCASSSI AANESAASEG  300
AESKVDASSI ELSSHLESFP KLDSSRIVGE NGEHGGLGTP LQSASLRYGY LCYEPPYVPL  360
DSDLMNGHFI PQSNRDSPGC SPSSFFTPPS ANRGSFNMRS PESILRLAAL SFPNTPSIFR  420
KRKAQTHKDV PPCKLMKADA DLVKSRVDDS DDRERCKESL EKYGSLDEQD SPTHHSNGAI  480
SPDGNAFNAS PPYRLRSKRT AVFKSVEKQL QFTNEEEKLG SDNTKSASNL SAKESDQCTE  540
DTSLGPTKMG VT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09370.1	1e-157	MYB family protein