PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82282.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 462aa MW: 51030.8 Da PI: 7.669

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14	9.5e-05	359	391	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++++L++++ + +K + a++L +A+ YIk Lq OWM82282.1 359 DRIATLQQIVSPF-----GKTDTASVLMEAIAYIKFLQ 391 8999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MWDLHNTSSY SLSAWTTTPT PPPPSSTISF NDHYVHPVNP SLSSPCEDDV SISTSSFTNA 60 SGHSALTVES SGRPPIKTTA SSSDELMIGD HGNNHHLWSH FLLSDAPDED LHKYEPEIRE 120 NLMDAVSSKS ASPGGIFEQA ACDYLKKLDN SYWDNPVDKE YMNSNGSSFI EEERLSKLSD 180 LLTSDWSIAT PHEYTMHLLS DYTPGGMMGG RDSDRHPYKG HDNPSIEREA AYRNGTGKYA 240 SNIGLHQNGN KLISCGNTRS LADLISFSSR LISKPSLDVK VPRPISTPNV KSKQGLKSTS 300 TSTQVNGRSG HRSGTTNEGK RKRSSCEDST SSDKLQKKHK HENSSSVSIP KAPKVKLGDR 360 IATLQQIVSP FGKTDTASVL MEAIAYIKFL QEQVQLLISN PYLKTNPRRE YPWGGGLERK 420 EVKVDLRSRG LCLIPVSCAP QVCRDNTGSD YWSLPYRGVF YR

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MWDLHNTSSY SLSAWTTTPT PPPPSSTISF NDHYVHPVNP SLSSPCEDDV SISTSSFTNA  60
SGHSALTVES SGRPPIKTTA SSSDELMIGD HGNNHHLWSH FLLSDAPDED LHKYEPEIRE  120
NLMDAVSSKS ASPGGIFEQA ACDYLKKLDN SYWDNPVDKE YMNSNGSSFI EEERLSKLSD  180
LLTSDWSIAT PHEYTMHLLS DYTPGGMMGG RDSDRHPYKG HDNPSIEREA AYRNGTGKYA  240
SNIGLHQNGN KLISCGNTRS LADLISFSSR LISKPSLDVK VPRPISTPNV KSKQGLKSTS  300
TSTQVNGRSG HRSGTTNEGK RKRSSCEDST SSDKLQKKHK HENSSSVSIP KAPKVKLGDR  360
IATLQQIVSP FGKTDTASVL MEAIAYIKFL QEQVQLLISN PYLKTNPRRE YPWGGGLERK  420
EVKVDLRSRG LCLIPVSCAP QVCRDNTGSD YWSLPYRGVF YR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	2e-52	bHLH family protein