PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82277.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 143aa MW: 16753.9 Da PI: 10.2071

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.8e-33	63	121	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ OWM82277.1 63 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHS 121 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MSNKLMRSSD IVVGDGDYHQ QQRHGSNNSL LGISAMKMKK IKSRRKVREP RFCFKTLSEV 60 DVLDDGYKWR KYGQKVVKNT QHPRSYYRCT QDNCRVKKRV ERLAEDPRMV ITTYEGRHAH 120 SPSHDTEESQ AASNAQLNSD FFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	1e-62	WRKY family protein