PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82193.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 343aa    MW: 38363 Da    PI: 8.4839
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.51e-12121212199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+kv +   +l++g + +p kf++++g++     +++l+ + + +W v +  ++  g+ +l++GW+eF +   L +g f++F+ld+  +f  +v +f++
  OWM82193.1 121 FCKVVVA-ESLRRGKIEIPLKFVRKYGHD--LLNQVVLKVPGNDEWLVAV--EQAHGKLWLGEGWREFQDHYCLIQGSFLLFQLDNLIGF--HVLIFDR 212
                 5666644.5566777***********988..6678***************..*******************************9765777..9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MYGTDLDEDV RFYFYIELQR GLGLGSHSFF FLTGKVGRER ERGLECGHCC VCSFSLRSCF  60
PVASGGRGGG EPSEQGAGAT GLQLLCISLH FQMASGSRLR RGGSSSNVGR SSGFRPRSPH  120
FCKVVVAESL RRGKIEIPLK FVRKYGHDLL NQVVLKVPGN DEWLVAVEQA HGKLWLGEGW  180
REFQDHYCLI QGSFLLFQLD NLIGFHVLIF DRTATEIDYP ARNPRGVSSE LTDKFIPSET  240
KDDSDDSLAE NHSDSEPKPE QRQCKRRRRP LKPSKQRRPR VPVEVDDSSS AFSLSTQSEY  300
SANSLSTHLE YESDGSKPES RRLGGPQRQK GNHLPRGSAS TFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-17B3 family protein