PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82177.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 293aa    MW: 32326.7 Da    PI: 6.6812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.3e-1488139155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r+ah ++Er+RR+++N+ ++ Lr+++P++   +  +++ a+i e Av+++k+L+
  OWM82177.1  88 QRTAHIAVERNRRKQMNEYLAVLRSMMPPS---YTHRVDQASIIEGAVNFVKELE 139
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MTGIQTPEKS DNDVAILEKS VAGVSSWDSG PMVGCDGGIN SSSSSSLPPE DFGGGSMMFP  60
AMDVAVGCRR KIRRKARVVK NKEEVENQRT AHIAVERNRR KQMNEYLAVL RSMMPPSYTH  120
RVDQASIIEG AVNFVKELEQ LLQSLKAAQR KVSGNKNTTN DLSSSPFADF FTFPQYSADP  180
TQLNHYAGPT VETMVGPERP ETAIANVEVT MADNHANVKV LSTKQPKQLL KMVVRLQYLG  240
VSILHLNVTT VNDMVLYSFS TRVEDNCQFT SANEIAAAVY EMVVRIQEEA NFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-69bHLH family protein