PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82174.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HSF
Protein Properties Length: 271aa    MW: 29850.3 Da    PI: 7.5717
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.52.8e-35151062102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+ +++++sw+e+g +fvv+++ efa ++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+++kell+ i+
    OWM82174.1  15 FLTKTYQLVDDPGTDKVVSWDESGATFVVWNTAEFAGDLLPNYFKHNNFSSFVRQLNTYGFRKIAPDK---------WEFANDNFKRDHKELLTGIR 102
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    OWM82174.1 103 RRKA 106
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGIQPQQQRS APAPFLTKTY QLVDDPGTDK VVSWDESGAT FVVWNTAEFA GDLLPNYFKH  60
NNFSSFVRQL NTYGFRKIAP DKWEFANDNF KRDHKELLTG IRRRKAVPTP PQSAAAAASN  120
SGDDQGSSST SSPDSKSPGS ANTSALTSQF ADLTDENEKL KREKEQLSTE LAQTKKQCDE  180
MVAFLTGYLK VAPDQISLIM RQGAGGAARD GGEEGLKLKL FGVWLDEGKE QNKKKREREE  240
KVGLTGPGGP EEMRAFDLHP HPPLKSSKVC N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.18e-70HSF family protein