PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82166.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 1093aa MW: 118275 Da PI: 7.0415

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6e-12	159	198	11	55
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rRR+riN+++ L++l+P++ K +Ka++L +A+eY+k+Lq OWM82166.1 159 RRRSRINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKQLQ 198 89***************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1093 aa Download sequence
MGEESMEEKA SCSSTANATA NANANAAPTP SPDDISHFLH YFLLRSSSSS SSSSHAQRDP 60 HHQQLHSLFL SSDIHRPPPG LPPAGDAIHA ADSSAGGGGV YLPSASGPHA PSSSVGASEN 120 ETDEYDCESE EGLEALLEDI PPKLNPSRSS SKRSRTAERR RSRINEKMKA LQSLIPNSNK 180 TDKASMLDEA IEYLKQLQLQ VQMLSMRNGL TLHPMCVPGV LQPIQIPQMR ALFGEENENL 240 HTNPINQETP TQQTTFGPPD QHTSIEPPLT NMFDSGPTFG LESSLPIHPG PYQLNSASEA 300 DGFSKTFGDN GVMENIWMLI LSLVKSGLEN GHNRLYICYV GLRNKLFLRG RQPRTSYIIH 360 MNVQSMPKVF SDHHNWYLNT LSSVSENRGE IPSHKLIYTY SSSLHGFSAT LSPAELDALK 420 ESLGFVSCTV DRPLELHTTH TPEFLGLGPA LGAWPASRYG EDVIIGFVDT GVWPDSLSFH 480 DEGIGSIPLR WRGACESGMG FKPSSCNRKL IGARFFNKGL LANRPNGTLS MSSGLDTAGH 540 GTHTSSTAAG NFVKGVSYFG YASGTAKGVA PHARIAMYKA VWTHGVYSSD VIAAIDRAIE 600 DGVDVLSLSL GFSSGGSFLG DDPIAVATFA AMEKGLFVAA SAGNDGPLHW SLMNGAPWIM 660 TVGAGTIDRE FYGMLTLGSG ATITFPSLYP GKPFLGPLDI VFMGACDDVP KLESVRGKMI 720 VCKDKLGINA QVEKAMTARV TAAVFITEVS VSEFYTRSSF PAAFVGLRDG QILMDYIQRS 780 SIPKGRLVFQ KTRIGTRPAP RVEIYSSRGP FVSCPNILKP DLIAPGTQVL ASWAPQTPVG 840 EVKSGSLYST FNLVTGTSMA APHVAGAAAL VKSVHPDWSP AAIRSALMTT AYLLDNTRTP 900 IKDIANYNLP ASPLDIGSGH INLSRALDPG LIYDENPQGY ISFLCGMNYR PKQLLAITRS 960 VSHCIKRSLD LNYPSFIAFT DREGSHSGGN FVKEFWRTVT NVGNDRSAYA AKVIGLEGIR 1020 VRVEPDRLMF KQKNEKLRYK LTLEGPRLSA EEVVHGSLIW VEDSGRYSAS SPIVVTSLVQ 1080 ESPFIRSKSD RQV

Sequence ? help Back to Top

Protein Sequence Length: 1093 aa Download sequence

MGEESMEEKA SCSSTANATA NANANAAPTP SPDDISHFLH YFLLRSSSSS SSSSHAQRDP  60
HHQQLHSLFL SSDIHRPPPG LPPAGDAIHA ADSSAGGGGV YLPSASGPHA PSSSVGASEN  120
ETDEYDCESE EGLEALLEDI PPKLNPSRSS SKRSRTAERR RSRINEKMKA LQSLIPNSNK  180
TDKASMLDEA IEYLKQLQLQ VQMLSMRNGL TLHPMCVPGV LQPIQIPQMR ALFGEENENL  240
HTNPINQETP TQQTTFGPPD QHTSIEPPLT NMFDSGPTFG LESSLPIHPG PYQLNSASEA  300
DGFSKTFGDN GVMENIWMLI LSLVKSGLEN GHNRLYICYV GLRNKLFLRG RQPRTSYIIH  360
MNVQSMPKVF SDHHNWYLNT LSSVSENRGE IPSHKLIYTY SSSLHGFSAT LSPAELDALK  420
ESLGFVSCTV DRPLELHTTH TPEFLGLGPA LGAWPASRYG EDVIIGFVDT GVWPDSLSFH  480
DEGIGSIPLR WRGACESGMG FKPSSCNRKL IGARFFNKGL LANRPNGTLS MSSGLDTAGH  540
GTHTSSTAAG NFVKGVSYFG YASGTAKGVA PHARIAMYKA VWTHGVYSSD VIAAIDRAIE  600
DGVDVLSLSL GFSSGGSFLG DDPIAVATFA AMEKGLFVAA SAGNDGPLHW SLMNGAPWIM  660
TVGAGTIDRE FYGMLTLGSG ATITFPSLYP GKPFLGPLDI VFMGACDDVP KLESVRGKMI  720
VCKDKLGINA QVEKAMTARV TAAVFITEVS VSEFYTRSSF PAAFVGLRDG QILMDYIQRS  780
SIPKGRLVFQ KTRIGTRPAP RVEIYSSRGP FVSCPNILKP DLIAPGTQVL ASWAPQTPVG  840
EVKSGSLYST FNLVTGTSMA APHVAGAAAL VKSVHPDWSP AAIRSALMTT AYLLDNTRTP  900
IKDIANYNLP ASPLDIGSGH INLSRALDPG LIYDENPQGY ISFLCGMNYR PKQLLAITRS  960
VSHCIKRSLD LNYPSFIAFT DREGSHSGGN FVKEFWRTVT NVGNDRSAYA AKVIGLEGIR  1020
VRVEPDRLMF KQKNEKLRYK LTLEGPRLSA EEVVHGSLIW VEDSGRYSAS SPIVVTSLVQ  1080
ESPFIRSKSD RQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	5e-36	bHLH family protein