PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82158.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 371aa MW: 39770.2 Da PI: 9.9162

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.5	1e-31	300	357	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ OWM82158.1 300 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEGEHNHS 357 9***********************988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MRAALYQQPS LSFISSRCPS LFVTSFDGLC LSLMAVELML GCYRPESFTA KIEETAVKEA 60 ASGLESVGEL ITLLSSQSQQ QTHAVLDSSA PASKSPTDIE TDCRAVADAA VSKFKKVISL 120 LGRTRTGHAR FRRGPIAAAN KGLNSITEAT NKVIYYATPI QQFPPAAPPP QPPRNAMASE 180 RRDPSCTTTT INFSSYGSGP AGSFLTGGEP DRKGVSLSTS SGFQITDLSR SQVSSSVGRP 240 LLSSSASLKR KCSSETLGSG SRCGGSASGR CHCSKKRKMR LKRIVRVPAI SLKMADIPPD 300 EYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPSMLVVTY EGEHNHSLAV 360 ADSANLILES S

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MRAALYQQPS LSFISSRCPS LFVTSFDGLC LSLMAVELML GCYRPESFTA KIEETAVKEA  60
ASGLESVGEL ITLLSSQSQQ QTHAVLDSSA PASKSPTDIE TDCRAVADAA VSKFKKVISL  120
LGRTRTGHAR FRRGPIAAAN KGLNSITEAT NKVIYYATPI QQFPPAAPPP QPPRNAMASE  180
RRDPSCTTTT INFSSYGSGP AGSFLTGGEP DRKGVSLSTS SGFQITDLSR SQVSSSVGRP  240
LLSSSASLKR KCSSETLGSG SRCGGSASGR CHCSKKRKMR LKRIVRVPAI SLKMADIPPD  300
EYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPSMLVVTY EGEHNHSLAV  360
ADSANLILES S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23320.1	2e-52	WRKY family protein