PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM81903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 406aa MW: 44987.1 Da PI: 9.9662 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.8 | 3.8e-27 | 282 | 334 | 3 | 54 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYeg 54 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYe OWM81903.1 282 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEV 334 99***********************9988**********************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 406 aa Download sequence |
MEEVEEANRA AVKSCHRVLN LLSDQTQSQS QWRNLMVETG EGVFRFKRVI SLLNKGLGHP 60 RIRKLNRLHH PPLPLSILLD SSLTSTDPSR LNNLHFLLPS STYPVSYPAG SSLQELRSHP 120 KGSFFPTLEL SSNGPGGKSP LQFGQLHPGP SPAQLHFLQQ QKLQHMYGSS NSGISLNFDS 180 SSCTPTPTPT PAMSSTRSFI SSLSMDASVA NMDASSFHLI GAARTSDQNS HHKRKCSGRG 240 EDGSVKCSSN SRCHCSKKRK HRVKRSIKVP AVSNKLADIP PDDYSWRKYG QKPIKGSPHP 300 RGYYKCSSMR GCPARKHVER CLEDPSMLIV TYEVSWKVEG LFYVLLRRFS SQQGKGDSED 360 FDLTFACLNK VSAWVVVDGA SHFQEGLTWL SYIIVSLTGI PSVTFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G04670.1 | 1e-89 | WRKY family protein |