PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM81711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 412aa MW: 45997.9 Da PI: 8.5536 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.2 | 4.9e-10 | 141 | 186 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 rWT+eE +++ +a +++ ++ W ++a++++ g+t +++ +++ OWM81711.1 141 RWTPEENKQFEKALALFDKDtpdKWFRVAEMVP-GKTVGDVIKHYRE 186 9********************************.***********96 PP | |||||||
2 | Myb_DNA-binding | 46.1 | 1.1e-14 | 250 | 294 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky OWM81711.1 250 PWTEEEHRQFLMGLKKYGKGDWRNISRFFVTTRTPTQVASHAQKY 294 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MGLFLSRNLA NLLISFSSKR AKLAGAVFPV QIEEMVSLVS RTGRHLQRYD KGCRQVVGCI 60 PYRYRKGGGE LEVLLVSSQK GKAMMFPKGG WEIDESMEEA ALRETIELSS SVEMNRGMEV 120 LSPASYIQNS NWLFQESEEA RWTPEENKQF EKALALFDKD TPDKWFRVAE MVPGKTVGDV 180 IKHYRELEED VSDIEAGLFP VTGYGSSSFT LEWVSGSDHG FDGLKQLYGP CGKRGTSTRP 240 SDQERKKGVP WTEEEHRQFL MGLKKYGKGD WRNISRFFVT TRTPTQVASH AQKYFIRQLT 300 GGKDKRRSSI HDITTGHLPD SNPSSPATSS LDNPPATVTK SQPHDQHQKM GGGMGKGPFG 360 WKQPTEVTSS VTEPFLGGSP YGYKFQEQNL LGGALLGSQF GGCNPVFQMH QY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-111 | MYB family protein |