PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81664.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 485aa MW: 53525 Da PI: 8.1938

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	110.5	7.6e-35	184	242	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +d++++ei+Y+g+Hnh+k OWM81664.1 184 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDDGQITEIVYKGTHNHPK 242 8********************************************************85 PP
2	WRKY	106.6	1.2e-33	339	397	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+a+d ++v++tYeg+Hnh+ OWM81664.1 339 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCPVRKHVERAAHDMRAVITTYEGKHNHD 397 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MDINGSRASE RGDRGGAQGL LPKFKGLPPP SLPLSPLPIS PSSFLGLPEL LDSPVLFSNS 60 NIVPSPTTGA FSSDGFHNWT NYSNCFQKSG DERCSDFSFR PPSEPSMIRS SSISQSSSTF 120 VSVEDPWKRQ EPQSFFKTST ASNTSSQRTG PKTELAPVHD FAASQSQVQN AQPPNYAREN 180 KKSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPNCPTKKKV ERSLDDGQIT EIVYKGTHNH 240 PKPQSTRKNG SQTQAIQAYA RTCSEFSDQS VTVQEDSSVS MGEEEFEQVS NSVGDDNESE 300 PEAKRCKGEN EYRNVSGAES RTVKEPRVVV QTMSEIDILD DGYRWRKYGQ KVVKGNPNPR 360 SYYKCTFTGC PVRKHVERAA HDMRAVITTY EGKHNHDVPV GRGGGSQSVD RGQVTGTNGV 420 GQGPIRPMPI ASHSRQPANQ AFGYTPEMFQ RTSGFGFTES LGLDSILSRA KEEPRDGSIF 480 DSFLA

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MDINGSRASE RGDRGGAQGL LPKFKGLPPP SLPLSPLPIS PSSFLGLPEL LDSPVLFSNS  60
NIVPSPTTGA FSSDGFHNWT NYSNCFQKSG DERCSDFSFR PPSEPSMIRS SSISQSSSTF  120
VSVEDPWKRQ EPQSFFKTST ASNTSSQRTG PKTELAPVHD FAASQSQVQN AQPPNYAREN  180
KKSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPNCPTKKKV ERSLDDGQIT EIVYKGTHNH  240
PKPQSTRKNG SQTQAIQAYA RTCSEFSDQS VTVQEDSSVS MGEEEFEQVS NSVGDDNESE  300
PEAKRCKGEN EYRNVSGAES RTVKEPRVVV QTMSEIDILD DGYRWRKYGQ KVVKGNPNPR  360
SYYKCTFTGC PVRKHVERAA HDMRAVITTY EGKHNHDVPV GRGGGSQSVD RGQVTGTNGV  420
GQGPIRPMPI ASHSRQPANQ AFGYTPEMFQ RTSGFGFTES LGLDSILSRA KEEPRDGSIF  480
DSFLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-111	WRKY family protein