PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81615.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 328aa    MW: 36322.2 Da    PI: 5.2683
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81615.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.22.6e-26141201259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg++WrKYGqK++ +++fprsY+rCt++   gC+++k+v++ ++dp++ +++Y+g+H+++
  OWM81615.1 141 DDGHQWRKYGQKSILNTNFPRSYFRCTHKldqGCQATKQVQKISNDPSLYQTIYHGQHTCQ 201
                 8***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
METAATGPLP ETLSAVIQEL LRGQDSAKKL RDLLRSPVDL KPLKEEEDRG GELAGLPRPP  60
PAAEDLVGDV FLSFTSALSI LNRGDSDEVS QGPRVIGSCN LVKSEESGES SKMSARRDRR  120
GCYKRRRSSD SWTTESPNFT DDGHQWRKYG QKSILNTNFP RSYFRCTHKL DQGCQATKQV  180
QKISNDPSLY QTIYHGQHTC QNLLKAPQII LADSSPRDSS ILLSFKTEKS PNDTSARTDS  240
NKNIALSYSP FPTLAMKREG NEVIATNCMN ASHNQSSSSE YDGFPSPDFT VFGSDQGEAL  300
SSSRSFDHNT DLMMDGVDFE DVFDCPFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-26WRKY family protein