PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81573.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

FAR1

Protein Properties

Length: 944aa MW: 106887 Da PI: 6.7566

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.8e-28	61	148	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk+++dgkw ++++ ++HnHel p OWM81573.1 61 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESESG---SSRRPSVKKTDCKASMHVKRRQDGKWIIHEFIKDHNHELLP 148 5*************************************9999877...77888899****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 944 aa Download sequence
MEGGDTLQIG PSDSLIDPAN EAHNRGGPAS SPKTPSVVFE EGVEIEPRNG IEFESHEAAY 60 SFYQEYAKSM GFTTSIKNSR RSKKSKEFID AKFACSRYGV TPESESGSSR RPSVKKTDCK 120 ASMHVKRRQD GKWIIHEFIK DHNHELLPAL AYHFRIHRNV KLAEKNNIDI LHAVSERTRK 180 MYVEMSRQSG GYQHVGMVQD GLNYQFEKGR HLNLDEGDAQ VILEYFKRIK KENPSFFYAI 240 DLNEEQRLRN LFWVDGKSRS DYMSFSDVVS LDTSYIKGNE KLPLVLFVGV NHHSQSMLLG 300 CALVADESRA TFVWLLKTWL MAMGGKSPKV ILTDQERALK AAVEEALPSA HHCYPLWDIL 360 EKVPENLAEV IKSHENFLPK FNKCIFKSWT DEKFDMRWWR MVTVFELHNN GWIQMLYEDR 420 KKWVPTFLGD TFLAGMSMPQ RSDSINSFFD KYVHKKITVK EFVKQFGLIL QNRYEEEAVA 480 DFDTLHKQPA LKSPSPWEKQ MSTVYTHAIF KKFQVEVLGV VGCHPKRERQ DGPIITFRVD 540 DCEKDENFMV TWNEVISQVS CSCHLFEFKG FLCRHAMIVL QICGLSSIPP HYILKRWTKD 600 AKTGQPAEGE ETKRIKTGVQ RYNDLCRRAI QLSEEGSLSE ETYRIAFRAL VEALKNCVNV 660 NNSSSAGAES SNGIIGLREI ELENQGNLAS RTSKKRTTNR KRKVQEESDV LMVEGQDGLH 720 QMDNLSTEGI TFSGYYGAQQ NVQGLVQLNL MEPPQDAYYV SQPSLQGLGQ LNSIAPGHDG 780 FFGTQQGIHG LGQIDFRTPG SFSHSLQLHG EVEQEPGSWQ QEPSSMNSRV EEISSCDASS 840 VKDVPVTTSN AISERINEGS SLQPQGGPLG DPPDAEDAEP LNTLPPIRGP YYINFSAGVV 900 HVNPMLTQVG HFDIPTSFQE IVQPVRSLEL DRMSSKKAKQ NPPR

Sequence ? help Back to Top

Protein Sequence Length: 944 aa Download sequence

MEGGDTLQIG PSDSLIDPAN EAHNRGGPAS SPKTPSVVFE EGVEIEPRNG IEFESHEAAY  60
SFYQEYAKSM GFTTSIKNSR RSKKSKEFID AKFACSRYGV TPESESGSSR RPSVKKTDCK  120
ASMHVKRRQD GKWIIHEFIK DHNHELLPAL AYHFRIHRNV KLAEKNNIDI LHAVSERTRK  180
MYVEMSRQSG GYQHVGMVQD GLNYQFEKGR HLNLDEGDAQ VILEYFKRIK KENPSFFYAI  240
DLNEEQRLRN LFWVDGKSRS DYMSFSDVVS LDTSYIKGNE KLPLVLFVGV NHHSQSMLLG  300
CALVADESRA TFVWLLKTWL MAMGGKSPKV ILTDQERALK AAVEEALPSA HHCYPLWDIL  360
EKVPENLAEV IKSHENFLPK FNKCIFKSWT DEKFDMRWWR MVTVFELHNN GWIQMLYEDR  420
KKWVPTFLGD TFLAGMSMPQ RSDSINSFFD KYVHKKITVK EFVKQFGLIL QNRYEEEAVA  480
DFDTLHKQPA LKSPSPWEKQ MSTVYTHAIF KKFQVEVLGV VGCHPKRERQ DGPIITFRVD  540
DCEKDENFMV TWNEVISQVS CSCHLFEFKG FLCRHAMIVL QICGLSSIPP HYILKRWTKD  600
AKTGQPAEGE ETKRIKTGVQ RYNDLCRRAI QLSEEGSLSE ETYRIAFRAL VEALKNCVNV  660
NNSSSAGAES SNGIIGLREI ELENQGNLAS RTSKKRTTNR KRKVQEESDV LMVEGQDGLH  720
QMDNLSTEGI TFSGYYGAQQ NVQGLVQLNL MEPPQDAYYV SQPSLQGLGQ LNSIAPGHDG  780
FFGTQQGIHG LGQIDFRTPG SFSHSLQLHG EVEQEPGSWQ QEPSSMNSRV EEISSCDASS  840
VKDVPVTTSN AISERINEGS SLQPQGGPLG DPPDAEDAEP LNTLPPIRGP YYINFSAGVV  900
HVNPMLTQVG HFDIPTSFQE IVQPVRSLEL DRMSSKKAKQ NPPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein