PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81508.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 947aa MW: 107573 Da PI: 5.1419

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.4e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l OWM81508.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	28.4	3.7e-09	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+t a +g Rt+ qc +r+ k+l OWM81508.1 60 TEWTREEDEKLLHLAKLMPMQ-WRTLAPIVG--RTPSQCLERYEKLL 103 68*****************.99998..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 947 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPMQ WRTLAPIVGR TPSQCLERYE KLLDAACAKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDNRRL RKKRKGIDYN AEIPFEKRPP PGFYDVTGED KTVKQPKFPT 240 TIEELEGKRR ADIEAQLRKQ DIAKNKIAQR QDAPSAILQA NKMNDPEAVR KRSKLMLPAP 300 QISDHELEEI AKMGYASDLL AGNEELTEGS AATRALLANY SQTPRQGMTP IRTPQRTPAE 360 KGDSILMEAE NLARLRESQT PLFGGQNPDL HPSDFSGVTP KKRELQTPNP MLTPSMTPGG 420 GVTPRLGMTP AREGSSFGMT PKGTPMRDEL HINEERDIHD GSKLELRRQA DLRRNLRSGL 480 SGLPQPKNEY QIVMQPIPEE NEEPEEKIEE DMSDRIDREK AEEEARQQAL LRKRSKVLQR 540 ELPRPPAASL ELIKSSLMRA EGDKSSFVPP TPIEMADEMV RKELLALLEH DNAKYPLDGK 600 MNKEKKKASK RTANGPVVPE IDDFEEDELK GADSLIKEEA QYLRVAMGHE SESLDEFVEA 660 HKTCLNDLMY FPTRNAYGLS SVAGNMEKLE ALQNEFESVK KRIDEDREKS MRLEKKIKTL 720 THGYQMREKT LWDKIESTFK QMDTAGTELE CFQALQKQEQ LAASHRVSNL WEEVQKQKEL 780 ERTLQSRYGS LLAGLEKTKQ LIEGFRAEAQ RQEETEAKNH AFEMAKAASE VNVDPLVDEE 840 KESKAEVNVD SVADEEKGSM AVSGQEMDSA PTPNSGASAH NMNEEKTEDM NEEKTEDMNE 900 EKTEDVKQPD EEMPPVEKEE VAAEQDNSNA PMETEAAESV GNHVVRE

Sequence ? help Back to Top

Protein Sequence Length: 947 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPMQ WRTLAPIVGR TPSQCLERYE KLLDAACAKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDNRRL RKKRKGIDYN AEIPFEKRPP PGFYDVTGED KTVKQPKFPT  240
TIEELEGKRR ADIEAQLRKQ DIAKNKIAQR QDAPSAILQA NKMNDPEAVR KRSKLMLPAP  300
QISDHELEEI AKMGYASDLL AGNEELTEGS AATRALLANY SQTPRQGMTP IRTPQRTPAE  360
KGDSILMEAE NLARLRESQT PLFGGQNPDL HPSDFSGVTP KKRELQTPNP MLTPSMTPGG  420
GVTPRLGMTP AREGSSFGMT PKGTPMRDEL HINEERDIHD GSKLELRRQA DLRRNLRSGL  480
SGLPQPKNEY QIVMQPIPEE NEEPEEKIEE DMSDRIDREK AEEEARQQAL LRKRSKVLQR  540
ELPRPPAASL ELIKSSLMRA EGDKSSFVPP TPIEMADEMV RKELLALLEH DNAKYPLDGK  600
MNKEKKKASK RTANGPVVPE IDDFEEDELK GADSLIKEEA QYLRVAMGHE SESLDEFVEA  660
HKTCLNDLMY FPTRNAYGLS SVAGNMEKLE ALQNEFESVK KRIDEDREKS MRLEKKIKTL  720
THGYQMREKT LWDKIESTFK QMDTAGTELE CFQALQKQEQ LAASHRVSNL WEEVQKQKEL  780
ERTLQSRYGS LLAGLEKTKQ LIEGFRAEAQ RQEETEAKNH AFEMAKAASE VNVDPLVDEE  840
KESKAEVNVD SVADEEKGSM AVSGQEMDSA PTPNSGASAH NMNEEKTEDM NEEKTEDMNE  900
EKTEDVKQPD EEMPPVEKEE VAAEQDNSNA PMETEAAESV GNHVVRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	205	KKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRRLRKKRK
2	186	205	KRRELKAAGIDNRRLRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein