PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81346.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 624aa MW: 67426.5 Da PI: 6.7338

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	7.3e-32	265	322	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k OWM81346.1 265 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSP-DGRITEIVYKGTHDHPK 322 8**************************************.*************85 PP
2	WRKY	106.1	1.8e-33	434	492	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ OWM81346.1 434 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 492 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
METSPLGSGA GGGAPELRIR SSEPADDGIL SESASDDGAG PSAGGARYRL MSPAKLPITR 60 SAGITIPPGL SPTSFLESPV LLSNVKWLFY TREECPDGIL ILESGATSRA DSSFHNTSVV 120 EPSPTTGSFI KRQILHGSVV SPSSMKTLNC TSANGLDDRW PGYFEFKPPS RTSLVTAEFN 180 HQSEHVHAQA QYQARSFASA RDRAVSSDEL TLSTPSNLVT SGANPPAEID SEKSNQKEHL 240 QSEALSTQSD QKGSGSFPGA ENLSDDGYNW RKYGQKLVKG SEFPRSYYKC THPNCEVKKL 300 FERSPDGRIT EIVYKGTHDH PKPQPGRRFT AGTMMPIQEE RSERVSSFPG GTLGQTNGNI 360 EPSGTPELSP LAANDDITEG AACLSNRMND EADEDDLYSK RRRMDMGGLD ITPVVKPIRE 420 PRVVVQTLSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH VERASHDPKA 480 VITTYEGKHN HDVPIAKTSS HDTAGPSAAS EMPRVMPEGS REAISLDLGV GISSSTAAAA 540 ENRSVEQQHS LRQQFGQSQP HLSSSSDVRV VQGNAIASHY GAQNGGINLF GSRQNFNGGH 600 SIDVSTLNHS YSYPQNIGRI LTGP

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

METSPLGSGA GGGAPELRIR SSEPADDGIL SESASDDGAG PSAGGARYRL MSPAKLPITR  60
SAGITIPPGL SPTSFLESPV LLSNVKWLFY TREECPDGIL ILESGATSRA DSSFHNTSVV  120
EPSPTTGSFI KRQILHGSVV SPSSMKTLNC TSANGLDDRW PGYFEFKPPS RTSLVTAEFN  180
HQSEHVHAQA QYQARSFASA RDRAVSSDEL TLSTPSNLVT SGANPPAEID SEKSNQKEHL  240
QSEALSTQSD QKGSGSFPGA ENLSDDGYNW RKYGQKLVKG SEFPRSYYKC THPNCEVKKL  300
FERSPDGRIT EIVYKGTHDH PKPQPGRRFT AGTMMPIQEE RSERVSSFPG GTLGQTNGNI  360
EPSGTPELSP LAANDDITEG AACLSNRMND EADEDDLYSK RRRMDMGGLD ITPVVKPIRE  420
PRVVVQTLSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH VERASHDPKA  480
VITTYEGKHN HDVPIAKTSS HDTAGPSAAS EMPRVMPEGS REAISLDLGV GISSSTAAAA  540
ENRSVEQQHS LRQQFGQSQP HLSSSSDVRV VQGNAIASHY GAQNGGINLF GSRQNFNGGH  600
SIDVSTLNHS YSYPQNIGRI LTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-176	WRKY family protein