PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81218.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 438aa MW: 48002.7 Da PI: 7.3068

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.8	6.2e-06	322	360	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L OWM81218.1 322 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 360 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MAEEFGASGN MWDLSSSRNR FESGASSTSS SGLTSIGGFG WLTDMGDMKP RSSIDHSSPN 60 ISISSSGSGV TSAGFHHHHD AHNKLSLGAE STSSSNLAET SLHMMNLGLS SQAIDWNQQQ 120 PLLRGDKAAD SSFRSMLQDN MSSNANFQED AGTGSGQVQW RSENYMLHGI LGSDNQHQHS 180 GFENRPVNNS YPNYATANYG LSTNDQHPDH QFLPSNWSKV PQFLRNSPRK QLPQPHGTGQ 240 LHFSNNAPFW NATSGAAAVT DVRPSFFPPV QAQFPTPSFD EKPKNLLERG DSATTTKKSG 300 GEGANKRPRS ESTQSPLPAF KVRKEKMGDR ITALQQLVSP FGKTDTASVL SEAIEYIKFL 360 HEQVSALSSP YMKTGAIQQH HHHQHHQNTD KLKVDPEGPR QDLRSRGLCL VPLSSTFHVT 420 SHETSLEFWN PTFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MAEEFGASGN MWDLSSSRNR FESGASSTSS SGLTSIGGFG WLTDMGDMKP RSSIDHSSPN  60
ISISSSGSGV TSAGFHHHHD AHNKLSLGAE STSSSNLAET SLHMMNLGLS SQAIDWNQQQ  120
PLLRGDKAAD SSFRSMLQDN MSSNANFQED AGTGSGQVQW RSENYMLHGI LGSDNQHQHS  180
GFENRPVNNS YPNYATANYG LSTNDQHPDH QFLPSNWSKV PQFLRNSPRK QLPQPHGTGQ  240
LHFSNNAPFW NATSGAAAVT DVRPSFFPPV QAQFPTPSFD EKPKNLLERG DSATTTKKSG  300
GEGANKRPRS ESTQSPLPAF KVRKEKMGDR ITALQQLVSP FGKTDTASVL SEAIEYIKFL  360
HEQVSALSSP YMKTGAIQQH HHHQHHQNTD KLKVDPEGPR QDLRSRGLCL VPLSSTFHVT  420
SHETSLEFWN PTFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-61	bHLH family protein