PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81090.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 380aa MW: 41940.2 Da PI: 7.5426

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	33	87	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl OWM81090.1 33 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 87 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.8e-23	35	86	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ OWM81090.1 35 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 86 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MFHSKKPSSM NSSHDRPLCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT 60 PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEFNDHSI KEAAALELQR NSASSSAMLG 120 RSMNDNSHAV DATRMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQSILEK ACQTLAGENP 180 MVASAGGGYK GMLNNQGIPI NMGGSMKDFG SPLSFPSFQD LNIYGPPGPD QIDHQLQHGM 240 DRPLLIDHSF MPANNSNSAN TDSMGSCFGK KRPGTPNNNY GATSGKNMNP LMWSDDLRLQ 300 EPCLGQQQDH HDPLFKGGDS MDRGPDLDSI SDIYETKPVL SGDDNLVGGD QKNNLKATAQ 360 SGTSLKGHRH EDQHLFPQTG

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MFHSKKPSSM NSSHDRPLCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT  60
PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEFNDHSI KEAAALELQR NSASSSAMLG  120
RSMNDNSHAV DATRMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQSILEK ACQTLAGENP  180
MVASAGGGYK GMLNNQGIPI NMGGSMKDFG SPLSFPSFQD LNIYGPPGPD QIDHQLQHGM  240
DRPLLIDHSF MPANNSNSAN TDSMGSCFGK KRPGTPNNNY GATSGKNMNP LMWSDDLRLQ  300
EPCLGQQQDH HDPLFKGGDS MDRGPDLDSI SDIYETKPVL SGDDNLVGGD QKNNLKATAQ  360
SGTSLKGHRH EDQHLFPQTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-119	G2-like family protein