PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM81056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | LBD | ||||||||
Protein Properties | Length: 158aa MW: 17354.4 Da PI: 7.8794 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 146.1 | 1e-45 | 14 | 113 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa vh++FGasnv kll++lpe++r+da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la++++ OWM81056.1 14 PCAACKLLRRRCAQDCVFAPYFPADDPQKFASVHRVFGASNVNKLLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQNQLAVAQA 112 7**********************************************************************************************9997 PP DUF260 100 e 100 e OWM81056.1 113 E 113 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MKESGGRKQG AVSPCAACKL LRRRCAQDCV FAPYFPADDP QKFASVHRVF GASNVNKLLQ 60 ELPEHQRSDA VSSMVYEANA RVRDPVYGCV GAISSLQQQV DVLQNQLAVA QAEVVHMQLR 120 QGVSSNSRES GSSPSSRANN SHQQSSYYSM DMEESLWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 1e-59 | LBD family protein |