PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80866.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 348aa    MW: 38309.8 Da    PI: 7.1389
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000132332721155
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ ++++ L++l+ +      +K + a++L +A+ YIk L+
  OWM80866.1 233 VRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLE 272
                 67789999*********998.....8****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MAQNLGFQLA DLSNVSDNFP RMFADMLVNG DSASAIGEDL YLRPLSNHTT VKNNDLSAEL  60
SEKLMLKTLS SSSRIGGGLH RFIIPGDDEF RFSSSSRGLT TNFSQIHPSI NISNPSYHSS  120
CPKTSSFNCR NNWPTFDLLS NGRICENDAK TSGASDFGSL LQESTFIPDF GLHHMKQACR  180
RETTSFERMS SFSPNTMEAK RPNSSINEPK ASQVAPKKTR LESQSTSCPH MKVRKEKLGD  240
RIAALQQLVA PFGKTDTASV LMEAIGYIKF LENQVQTLSV PYMKSSRNNN GTSDRESRNE  300
DAYDNEEPRQ DLRSRGLCLV PLSCMSYITN DGGGGGSIWP SQDFGGGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.17e-59bHLH family protein