PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80644.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 362aa MW: 40059.6 Da PI: 4.5554

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.1	2.1e-10	287	327	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rrRR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq OWM80644.1 287 RRRRERINERLRILQNLVPNG-----TKVDMSTMLEEAVHYVKFLQ 327 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEPIQSMLGA FPYGDQWDPL SVLFNNEDLE MTQRLLGQCP PGLEIPRDCF FASPEEFPED 60 QMMPAGMCEG FLNPALTPSR NSLMGSSSQE GSYASTSVDG HYYPGMSTFS MEEKYSGESF 120 VPDFTGILAG EGFCQSDNNA ACTDVWAEQL EQQAVVKRSQ PKRGCTGSNS CTAEEDDAET 180 DAPENLKKRK PRASRSDKGK AKKNVQPKKK QQLAKLNGDE VVEGNLIARQ EGQSSSTCSS 240 EEDSVSQELN NGESTQNSKE ISALSSDGKQ TRASRGTATD PQSLYARRRR ERINERLRIL 300 QNLVPNGTKV DMSTMLEEAV HYVKFLQLQI KLLSSDELWM YAPIAYNGMD IGLNQILPRQ 360 LS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEPIQSMLGA FPYGDQWDPL SVLFNNEDLE MTQRLLGQCP PGLEIPRDCF FASPEEFPED  60
QMMPAGMCEG FLNPALTPSR NSLMGSSSQE GSYASTSVDG HYYPGMSTFS MEEKYSGESF  120
VPDFTGILAG EGFCQSDNNA ACTDVWAEQL EQQAVVKRSQ PKRGCTGSNS CTAEEDDAET  180
DAPENLKKRK PRASRSDKGK AKKNVQPKKK QQLAKLNGDE VVEGNLIARQ EGQSSSTCSS  240
EEDSVSQELN NGESTQNSKE ISALSSDGKQ TRASRGTATD PQSLYARRRR ERINERLRIL  300
QNLVPNGTKV DMSTMLEEAV HYVKFLQLQI KLLSSDELWM YAPIAYNGMD IGLNQILPRQ  360
LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27740.1	8e-40	bHLH family protein