PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80199.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Dof
Protein Properties Length: 171aa    MW: 18977.6 Da    PI: 9.3229
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1222.1e-384199260
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                ++k+++cprC+s++tkfCy+nny+++qPr+fC++C+ryWt+GGalrnvPvG+grrknk 
  OWM80199.1 41 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCRGCQRYWTAGGALRNVPVGAGRRKNKP 99
                68999****************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MESPTPGIKL FGTTITLQDK KTNNGSPEKS DQEIAAELKR PDKIIPCPRC KSMETKFCYF  60
NNYNVNQPRH FCRGCQRYWT AGGALRNVPV GAGRRKNKPP CRPGLPGFAE NISARLYEAS  120
EVQQYFDLEG VVAAAAAAET WHLMSAQGSF QQVLPAVKRQ RSAMIGDHQS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.16e-51Dof family protein