PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80155.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 334aa MW: 36243 Da PI: 8.591

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.1	6.9e-40	127	204	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv+gCe+ l+ keyh+rh+vCe hskapvv+v gl qrfCqqCsrfh +sefDe+krsCrrrLa+hnerrrk+++ OWM80155.1 127 RCQVQGCEVTLEGSKEYHKRHRVCEEHSKAPVVVVLGLPQRFCQQCSRFHVVSEFDESKRSCRRRLAGHNERRRKSSH 204 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MENGGKMYGL TCRSDSSALA GPYCNVTTTA VPFLPCPWDT VGSGSGGYLT SPPRLDLANS 60 SLSVDRHAGP AGSAVQADPH LTCLGLGKRH WRHFGDGVSA VAGVFSEGGK RGRCGYYRSR 120 AAAVVARCQV QGCEVTLEGS KEYHKRHRVC EEHSKAPVVV VLGLPQRFCQ QCSRFHVVSE 180 FDESKRSCRR RLAGHNERRR KSSHDYVPRT RTSSQGGAYS LLSSTTETCG LFPSNLSLQC 240 SAALRELIAE HRATILAHQL VLEGCMMDSG PSSSSVSSMR LHQVPHPVLP TLKSADESGQ 300 QVTLDLMQSP ISAFGGLPMR GKQQQECYEL WNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	6e-36	SBP family protein