PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79935.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 370aa    MW: 39309.3 Da    PI: 6.9647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.6e-20165214255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  OWM79935.1 165 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDRAAYKLRG 214
                 59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MAAGMDFYNT NQYQEPDPFG NNELMEALGP FMKSASSLEE THHFPSSSSS SSYLPSGSDF  60
AQPSVPSSSS SFFFSSAESV HPSYQTFDGY SAPATLPFSI GSSDASQSIG SGYYSSFQSQ  120
VTPAQHQIQF QGPSSETTTW QGGFLGPRPM VMKQAGQPSS KPAKLYRGVR QRHWGKWVAE  180
IRLPKNRTRL WLGTFDTAEE AALAYDRAAY KLRGDFARLN FPNLKAASAG NGDCGFGDLR  240
PLHSSIDAKL EAVSRSIAEK ASSGGRKSSR KAACKAEEGE GEGEGEEENT SSSEVAGNAA  300
VGSFQDEHRL DRDHIRLMLK RKSSSFLRRV GGVRKVALVL GTDLEMGINP AGGGGGGGGG  360
GGGGEVPFPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-42ERF family protein