PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79853.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 409aa    MW: 44335.8 Da    PI: 7.0369
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.6e-21204253255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrd +     r  r++lg+f+tae Aa+a+++a+++++g
  OWM79853.1 204 KYRGVRQRP-WGKWAAEIRDpF-----RaSRVWLGTFDTAEAAARAYDEAALRFRG 253
                 8********.**********66.....68************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MYGYIHTYMC VSALNNKVAD RRDKSEADPE ESSGDRDLDR WLFGNFSGQQ TSPPQPVQFP  60
SLPVPQIDRE REMSAMVSAL TRVVSGESAP VDRADTREMG RDGGSSSGSG VGRKRAHEDD  120
DDQLGGVSVH GGEGQEALRE APGGDFPRGG LSSLASQRAL IIEGSSTRSS SESDPSQQAF  180
TQTYEYAHQP SLISNTNMDE PRRKYRGVRQ RPWGKWAAEI RDPFRASRVW LGTFDTAEAA  240
ARAYDEAALR FRGSRAKLNF PENVRLRAPH QPPELINHPS AAAHTVSSMP GSSESSVSIA  300
SVPIISTSSS LIRQPMSLSD QMFFAGRSSH QIQSSLSSSS RPLLRLPSTA SSMSSSSSSP  360
LPPPAAQFFP VLRPVRPRPS PPSSSQTSDE VFPLPPWSDS SHYSSSSSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.18e-20ERF family protein