PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79835.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family CO-like
Protein Properties Length: 425aa    MW: 46691.2 Da    PI: 5.433
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box16.12.3e-054772530
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedCl 30
                 C+++++++++  C d +  lC++C 
  OWM79835.1 47 LCNRCSSQPAIVRCLDEKLSLCQSCD 72
                6************************7 PP

2CCT44.26.8e-16360407145
         CCT   1 ReaallRYkeKrkt...RkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                 R++a+ RYkeK++     +F K+irY+sRKa+Ae+R R++GrFvk++e
  OWM79835.1 360 RDKAKIRYKEKKNCwslDQFGKHIRYASRKARAETRRRIRGRFVKASE 407
                 888999******962225799************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MECSCDFCRA ANAVVYCNSD SARLCLHCDG YIHSANSLAS RHSRWFLCNR CSSQPAIVRC  60
LDEKLSLCQS CDWNGLEMGC SGLGHSRQAL EIYTGCPSLA EFSTILASAL NQPPHPSELG  120
EGWGPSDELS CVFENKGTVS FYGTMDRNAF HKQDPWSGHS TGFTSNNHYV LFCKGEAPSA  180
CLDPNPSKVP FCCSEHFKNP GNEDSGAGLV PNLDMDDFPQ MGNSKDVLDC ETDEVLYQFT  240
DEELECLLME KNGPTDNAIE ASSSVQPECA SFQPARIGNL ILGMQGVKGS SSTTDNCMLT  300
NPPYSSIGMG FPTPSMSLPL HNITGESHAI EYQDSGISPM LLSVKSPWDP KPEGSCPQAR  360
DKAKIRYKEK KNCWSLDQFG KHIRYASRKA RAETRRRIRG RFVKASEADD PQGTTNNTSF  420
KEEKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21880.15e-55CO-like family protein