PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79735.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 986aa MW: 109247 Da PI: 6.2877

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+ +lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ OWM79735.1 148 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNIMQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNKRRRKTNP 225 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MEARIEAEAH HYYGMASVGK RSLEWNLNDW KWDGDLFIAR PLNPVPSDYL GQQFFPLGNG 60 IPTAGNSSNS SSSCSDEANL GFENGKRELE KRRRVIVVEH DNLDDKANGL TLKLGEQGYP 120 IAEREAGIWE GNSGKKAKVV GGSASRAVCQ VEDCGADLSN AKDYHRRHKV CEMHSKASRA 180 LVGNIMQRFC QQCSRFHALQ EFDEGKRSCR RRLAGHNKRR RKTNPDAAAT ANPLNDDQAS 240 GYLLISLLKI LSNMHTNPSK QSADQDLLTH LLRSLASNQI GGKNISGLLQ ESQNIASGGA 300 SLCKSEAIPA VVSKGLEGPS RSPKLPQAQP TPCDLNGVQS YTEGRNPTGR QSKLNKFDLN 360 DVYVDSDDGL EDLERSPVPA NPRTDSLDCP SWMQQESHQS SPPQTSGTSD SASALSPSSS 420 SGDTQSRTDR IVFKLFGKEP NDFPLLVRAQ IFDWLSHSPT DIESYIRPGC VILTIYLRQC 480 EDAWEELSDD LGSSLSRLID VSEDSFWKTG WMYIRVQHQM AFIYNGQLVL DTLLPSRSIN 540 HSNIVSVRPI AVSASEKTQF LVKGFNLCNP SSRLLCALEG KYLLQEATQD LLDEDNISEH 600 DELRSVKFSC SIPAVTGRGF IEIEDRGLPG SFFPFIVAEA DVCSEIRTLE GALELIGTDS 660 DIEGTTEIQA KDQVLEFINE MGWILHRSGL RSRLGQLDPN TELFSFRRFR WLVEFSMDHD 720 WCAVVKKLLD ILFDGIVGAG EHPKLYLAVL EMGLVHRAVR RNCKPLVELL LRYIPQWVSD 780 NVASELRLLS DGKCQIFLFR PDAVGPAGLT PLHIAAGKDG SEDVLDALTD DPGMVGVEAW 840 KNARDSTGST PEDYARLRGH YSYIHLVQRK LNRRALPPQA SHVVLDIPDS SNAQQSHSKD 900 TTTTSSFEIG KIESSWKPGH RNSCRMCGQK LAYGIGGRSL LYRPAMLSMV AIAAVCVCVA 960 LLFKSSPEVL YVFRPFRWEL LEYGAS

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MEARIEAEAH HYYGMASVGK RSLEWNLNDW KWDGDLFIAR PLNPVPSDYL GQQFFPLGNG  60
IPTAGNSSNS SSSCSDEANL GFENGKRELE KRRRVIVVEH DNLDDKANGL TLKLGEQGYP  120
IAEREAGIWE GNSGKKAKVV GGSASRAVCQ VEDCGADLSN AKDYHRRHKV CEMHSKASRA  180
LVGNIMQRFC QQCSRFHALQ EFDEGKRSCR RRLAGHNKRR RKTNPDAAAT ANPLNDDQAS  240
GYLLISLLKI LSNMHTNPSK QSADQDLLTH LLRSLASNQI GGKNISGLLQ ESQNIASGGA  300
SLCKSEAIPA VVSKGLEGPS RSPKLPQAQP TPCDLNGVQS YTEGRNPTGR QSKLNKFDLN  360
DVYVDSDDGL EDLERSPVPA NPRTDSLDCP SWMQQESHQS SPPQTSGTSD SASALSPSSS  420
SGDTQSRTDR IVFKLFGKEP NDFPLLVRAQ IFDWLSHSPT DIESYIRPGC VILTIYLRQC  480
EDAWEELSDD LGSSLSRLID VSEDSFWKTG WMYIRVQHQM AFIYNGQLVL DTLLPSRSIN  540
HSNIVSVRPI AVSASEKTQF LVKGFNLCNP SSRLLCALEG KYLLQEATQD LLDEDNISEH  600
DELRSVKFSC SIPAVTGRGF IEIEDRGLPG SFFPFIVAEA DVCSEIRTLE GALELIGTDS  660
DIEGTTEIQA KDQVLEFINE MGWILHRSGL RSRLGQLDPN TELFSFRRFR WLVEFSMDHD  720
WCAVVKKLLD ILFDGIVGAG EHPKLYLAVL EMGLVHRAVR RNCKPLVELL LRYIPQWVSD  780
NVASELRLLS DGKCQIFLFR PDAVGPAGLT PLHIAAGKDG SEDVLDALTD DPGMVGVEAW  840
KNARDSTGST PEDYARLRGH YSYIHLVQRK LNRRALPPQA SHVVLDIPDS SNAQQSHSKD  900
TTTTSSFEIG KIESSWKPGH RNSCRMCGQK LAYGIGGRSL LYRPAMLSMV AIAAVCVCVA  960
LLFKSSPEVL YVFRPFRWEL LEYGAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	95	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein