PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | WRKY | ||||||||
Protein Properties | Length: 550aa MW: 59569.8 Da PI: 7.8314 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94 | 1.1e-29 | 283 | 341 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+ ed+ ++++tYeg+H h+ OWM79719.1 283 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCPEDKGILITTYEGNHSHP 341 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 550 aa Download sequence |
MDHNRRCHEL TFLHSGNFLR EAPVSTPMAD CHAGNPSHNT INRPPIREVD FFSVNSRDKF 60 DDDIREMKMS NGSRPTSKSD PRDGSNLLSL HSGMTRTTGG EDKPDAELRV LEVELERLHE 120 ENRKLRSMLD HISRNYSSLQ SQLLIAMQKQ AHHQVRLQDK EVMKSRSSPI KSTQQLTDRG 180 PPDVNDPKVP DEKTTGEASF SPTSNMEALS KESDHLITPR NKFRQTCSLN NEDDNVDQMS 240 QSWGSPRNDP ILKPEQAKDD QPEPAFRKAR VSVRARSEAP LISDGCQWRK YGQKMAKGNP 300 CPRAYYRCTM AAGCPVRKQV QRCPEDKGIL ITTYEGNHSH PLPPAAMATA STTSAAAAML 360 LSGSTTSKEG PANNNSALLF PSSIPYASTM ATLSASAPFP TITLDLTQTP NSLMQTFPRT 420 HLPPSTSTFP FPLHGYSQLA GLGLGHTMYG DGSSPGHPKL PVLPVPAMQL GQHQASLFET 480 VKAAIASDPN FTAALAAAIS TVIGAPPGSA DGSNGGGNGR NENSTMAGIA PVLPGSPYLP 540 QSCTTLSTNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01720.1 | 1e-72 | WRKY family protein |