PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79716.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 491aa MW: 54163.4 Da PI: 6.7534

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.5	1.5e-15	300	348	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++hn E++RRd+iN+++ L+ellP++ K++Ka++L +++eY+k Lq OWM79716.1 300 SASHNLSEKKRRDKINKRMRALQELLPNC-----NKVDKASVLDETIEYVKTLQ 348 689***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MTRDLATPVC RSAHDFEELV WENGTLFVRG TRDQNNNVLS SGYTGFSNNN RAGHEQVNKD 60 GAERALRLGN LPHEFMFTGD ASKPNNNDSR PHQTSTSCLG PGFDSNRYLL PTTGVSEPRS 120 RSLGEMNRVN FSFFLGINSL INEANGQGSR SNRSRFGALP KAETDKLNKM PSSEYKNQTG 180 SQKRPVHVLE TETEVVEAAP LCFGAGGGDF LVPDEHSQAI GNHFIDDHDI QNSTFDDDHQ 240 VPGPDSSIEA SNALLRKLKR RCEESESTYL NEDEDEEMED HKRRAIHYSG GRVGAKRRRS 300 ASHNLSEKKR RDKINKRMRA LQELLPNCNK VDKASVLDET IEYVKTLQLQ LQMMSTGTRL 360 FAPTMAMLPT GIPQMPMPYL NQFSTVSAGM GMRMGPAFAQ GPTHQFPLPG PGTTAFAGGF 420 QPMGCMPYIP LLGGHPALSS LMNGADFSRA AVTPNDQLGS AVISGSNDSK PEQEFLGTRG 480 QIRKEDSRYF E

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MTRDLATPVC RSAHDFEELV WENGTLFVRG TRDQNNNVLS SGYTGFSNNN RAGHEQVNKD  60
GAERALRLGN LPHEFMFTGD ASKPNNNDSR PHQTSTSCLG PGFDSNRYLL PTTGVSEPRS  120
RSLGEMNRVN FSFFLGINSL INEANGQGSR SNRSRFGALP KAETDKLNKM PSSEYKNQTG  180
SQKRPVHVLE TETEVVEAAP LCFGAGGGDF LVPDEHSQAI GNHFIDDHDI QNSTFDDDHQ  240
VPGPDSSIEA SNALLRKLKR RCEESESTYL NEDEDEEMED HKRRAIHYSG GRVGAKRRRS  300
ASHNLSEKKR RDKINKRMRA LQELLPNCNK VDKASVLDET IEYVKTLQLQ LQMMSTGTRL  360
FAPTMAMLPT GIPQMPMPYL NQFSTVSAGM GMRMGPAFAQ GPTHQFPLPG PGTTAFAGGF  420
QPMGCMPYIP LLGGHPALSS LMNGADFSRA AVTPNDQLGS AVISGSNDSK PEQEFLGTRG  480
QIRKEDSRYF E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	299	KRRAIHYSGGRVGAKRRR
2	296	313	KRRAIHYSGGRVGAKRRR
3	297	314	KRRAIHYSGGRVGAKRRR
4	308	313	KKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46970.1	3e-30	bHLH family protein