PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79714.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 401aa MW: 44657.9 Da PI: 5.8063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl OWM79714.1 14 KGLWSPEEDEKLLRHITLYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.1	5.4e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ OWM79714.1 67 RGAFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT LYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHRPLS EAEYGDEEAD KSAKSSQDAQ DMPGAASGSS STNELNLLST PNSRQATSIL 180 EIENCSGLKT PSSFNRDHLF MVQDGYMPES SDFAGNYPAV STQFSSDWVH TFVTHPDQFS 240 TTSSKAASSS MIQPLSTSML FPITVPPSMN PQLKPLIPFS ENWDTGNNGN LSVFDNNVFG 300 SWGLPAQQAQ VQSLEGQPEY LQVQNQLLNM AVTLQNQTQH QSNFYSQMKP DINFIPSTSG 360 AMWIQEEQPG GAPAEEEAVP DSDNTSCVKD VQRLTALFGH M

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT LYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHRPLS EAEYGDEEAD KSAKSSQDAQ DMPGAASGSS STNELNLLST PNSRQATSIL  180
EIENCSGLKT PSSFNRDHLF MVQDGYMPES SDFAGNYPAV STQFSSDWVH TFVTHPDQFS  240
TTSSKAASSS MIQPLSTSML FPITVPPSMN PQLKPLIPFS ENWDTGNNGN LSVFDNNVFG  300
SWGLPAQQAQ VQSLEGQPEY LQVQNQLLNM AVTLQNQTQH QSNFYSQMKP DINFIPSTSG  360
AMWIQEEQPG GAPAEEEAVP DSDNTSCVKD VQRLTALFGH M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	1e-93	MYB family protein