PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | WRKY | ||||||||
Protein Properties | Length: 361aa MW: 39221.3 Da PI: 6.181 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.1 | 1.4e-31 | 168 | 226 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp+++++tY+geH+h+ OWM79594.1 168 SDLWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPNMFIVTYTGEHTHP 226 799************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MADRDWDLSA VVRSWVPTAA YPATASATGG QGPNPSACLA TLTFHEEEEL GRESFLFGFP 60 NLTEPRNSGF NELQQLYIPF LPRAAADNPS PSVLGASLVS PAPVCVPRRV AQAPDSHSRS 120 VLQQQALHVN HQYNLTPAVQ PPQTPRTRKR KSQQKKNVCH VTAENLSSDL WAWRKYGQKP 180 IKGSPYPRNY YRCSSSKGCA ARKQVERSNT DPNMFIVTYT GEHTHPRPTH RNSLAGSTRN 240 KFTGALQKAQ AASHADDPGS MPTSLSPTTP LTAPIDEDGV IGRDNSVVEG ATRSENGEEG 300 EIGDDDMVAS EYEADLDGED LLIPNIANNI SEDMFMGFHG VNNNVPNSSY GIRQGSGSGD 360 Y |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 147 | 152 | TRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 3e-60 | WRKY family protein |