PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79585.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 313aa    MW: 34921.4 Da    PI: 9.4968
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.5e-125498147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       OWM79585.1 54 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 98
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MVSKNPNPGE GFFLDPNGMA LPGLGPFVAA STTAPPAEDP AKKVRKPYTI TKSRESWTEP  60
EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL KVQKNGTNEH LPPPRPKRKA  120
AHPYPQKASK NAQVHAQASG SFPPSSGMLE SGYVLRPDSS SILRTPNSPK LASLENNSMP  180
TINLPPTTKG ANVVNNSTSS SESTQRTRPV CEPTEQPRNN HTLRVLPDFA QVYDFIGSVF  240
DPDVTGHLQK LKRMDPIDVE TVLLLMRNLS INLTSPDFED HRKLLSTYET DFEINNQGKE  300
SRAFQDFQCK NVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-107MYB_related family protein