PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79508.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 764aa    MW: 83732.7 Da    PI: 6.4448
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.76.1e-24238292155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k ++ Wt  LH rF++a++  G  ekA+Pk++l+lm+v+gLt+e+v+SHLQkYRl
  OWM79508.1 238 KMKISWTAPLHYRFLQALSIVGSVEKAVPKKVLDLMNVPGLTRENVASHLQKYRL 292
                 56899*************************************************7 PP
2Myb_DNA-binding23.21.6e-07242291348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      +WT+ ++ ++++a    G+     +k++   m+  g+t++++ s++qky+
       OWM79508.1 242 SWTAPLHYRFLQALSIVGSVekaVPKKVLDLMNvPGLTRENVASHLQKYR 291
                      6*****************88*****************************7 PP
3Response_reg72.61.6e-24191271109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l+vdD+ + ++++  +l+  +  ev  a ++ +al++l+ ++  +Dl+++D  mp+mdGlel k+ ++e   lp+i+++a + +  +l++l+ Ga 
    OWM79508.1  19 ILVVDDDSICLDIVSGMLQGLKH-EVVKANHAIDALTTLRGRQgnVDLVVTDYHMPHMDGLELQKRVQNEY-ALPVIMMSADDRDYIMLRCLEQGAV 113
                   89*********************.9999***********666666**********************9987.************************* PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                    f sKp++peel +
    OWM79508.1 114 FFMSKPIHPEELKN 127
                   ***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    
MASNESQEMI QSSFVKIRIL VVDDDSICLD IVSGMLQGLK HEVVKANHAI DALTTLRGRQ  60
GNVDLVVTDY HMPHMDGLEL QKRVQNEYAL PVIMMSADDR DYIMLRCLEQ GAVFFMSKPI  120
HPEELKNVWQ YAVKGRKGKS IPIERIARPI PGSGPLGLAD SGPSSNHHHR QLGATSALSS  180
NNLIRDSSHP NRPQNPNEVS HDCEKQQQEP EKRKVQDKGQ TSTEKPNKRP YMVPTPRKMK  240
ISWTAPLHYR FLQALSIVGS VEKAVPKKVL DLMNVPGLTR ENVASHLQKY RLFLKEVAES  300
AKSQGSTSPT GFPPMIENEP DITPGVLDIR TPRPLEALQP NHVTFSIHDY YRSHRASLFP  360
GKPPLNPNIV SNYGSLGRPI APLPKANNRR ASWKKSITVD GSNHCGLYQP DRSALTTAPM  420
DRMNVNGAPH RNSHLKRNYA SLGSGYSTQG PGNSSQTHQQ ENLLAPKRFA SRLLGYGQAA  480
SGMSNIDSII GSRGSFANYL IPPSSAQPNE NSNYAGIRLT GNGDLLGLGQ PHKPNIAAIE  540
NNEIYAGFGS MGGIPPRTEK ATLLGQGTSN SNCFSPGESS TSKFWLASPS EVFPSADDQG  600
LAAPKEVENP FALEELIKTV LGENDDNPDH LIPGEGSSNS FPLENAVNYH SALPTQDHGK  660
NPISDVGNGS YQVQVNAQRN EVVNSDVCHS YSGEGNSSAW DKPSPGQYLV IDGDFIDEEI  720
AYLCADFFPV FDKNPNQLNS ISQEFDEDFI NSVLDGVEPY LNED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.13e-52ARR-B family protein