PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79507.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 23699.4 Da PI: 5.5638 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.1 | 7.1e-16 | 52 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +++g+Wv+eIr+p++ ++r++lg++ t+++Aa a++ a+++l+g OWM79507.1 52 NYRGVR--SRSGKWVSEIREPRK---TTRIWLGTYPTPDMAAVAYDVAALALKG 100 69***6..668*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDHHHHQPPP PSPDPPSLLP PPSLATPTTR PDPVSPRLVP SPDGSSGKHH PNYRGVRSRS 60 GKWVSEIREP RKTTRIWLGT YPTPDMAAVA YDVAALALKG PEATVNFPEL VHAYPVPAST 120 SAADIRAAAG RAAAAREPKP ELKQNQPVQS QPEGDAGASS GSTMTATSSA AAEQEFIDEE 180 AILDMPNLLV DMAKGMLVSP PRMKSASPDD SPEDSDGGGL WSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-36 | ERF family protein |