PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79379.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 442aa MW: 48802.9 Da PI: 6.4443

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.3e-30	251	310	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ OWM79379.1 251 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 310 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MDSECDQGKR GEENSGQVVG DRQGQEERGC GGKEDQSKVE EGTTTEANDA GEVEEGDEQQ 60 QEDTSIKLSH QQEIPKKHEL GELQKEMNRI REENKLLKKF VDQTMKEYYD LQTKVAQVQQ 120 ANRAMDQQIF LPLAGNPSRE QPKTVTTNSM EKSKDRSFSS PLGGDDSELE LSLRLHGTSA 180 TGKEEVRSDR SEETNYKDSH QNKQDINLTS VENYKIRRTD SSGVPGLSST VPSNRSKTRV 240 SVRARVQGAT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ RCLEDMSILI 300 TTYEGTHNHP LPVGATAMAS TTSTATSFML VDSSIPSLSN QYNISSDFIP SLGHLHSSIP 360 NPSSSPLALP YGASRSFTSP TDPSKDIVLD ITKIHCSASD HQKKQFPSSS SLDSSSTPTR 420 FPWINPSRSA LLGNLSPTEE KH

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MDSECDQGKR GEENSGQVVG DRQGQEERGC GGKEDQSKVE EGTTTEANDA GEVEEGDEQQ  60
QEDTSIKLSH QQEIPKKHEL GELQKEMNRI REENKLLKKF VDQTMKEYYD LQTKVAQVQQ  120
ANRAMDQQIF LPLAGNPSRE QPKTVTTNSM EKSKDRSFSS PLGGDDSELE LSLRLHGTSA  180
TGKEEVRSDR SEETNYKDSH QNKQDINLTS VENYKIRRTD SSGVPGLSST VPSNRSKTRV  240
SVRARVQGAT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ RCLEDMSILI  300
TTYEGTHNHP LPVGATAMAS TTSTATSFML VDSSIPSLSN QYNISSDFIP SLGHLHSSIP  360
NPSSSPLALP YGASRSFTSP TDPSKDIVLD ITKIHCSASD HQKKQFPSSS SLDSSSTPTR  420
FPWINPSRSA LLGNLSPTEE KH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	6e-62	WRKY family protein