PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79377.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | GATA | ||||||||
Protein Properties | Length: 253aa MW: 27804 Da PI: 5.1032 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 45.6 | 9.9e-15 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+++TplWR+gp ++ LCnaCG ++r +g+ OWM79377.1 7 CCHCGAKETPLWRNGPLEKPVLCNACGSRWRIRGT 41 99**************99999**********9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MRKQGPCCHC GAKETPLWRN GPLEKPVLCN ACGSRWRIRG TLENYVPKRG HGGGRRRSRK 60 MGYVIHDVNV DKTIPTSTIG TERAIGKGKN TSTSCAMNAN RTSESEICTI NRSTSESVTS 120 DSQKIIFHIV IKSEDEEDDD DGITDSGKDE GPSEADNEVP SPTGAFAHIK SLHRELLKLY 180 IEEKSSMEEE EEAVLIDNVN SFMYENEIMY GSYLLKPPLP NISPTEEAAL KGSASSSSSV 240 NQLDAKEETP PLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.1 | 3e-22 | GATA family protein |