PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79250.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family G2-like
Protein Properties Length: 308aa    MW: 34708.5 Da    PI: 10.1363
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.32e-29211266156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W+peLH+ Fv+ +e+LGG+  AtPk i+elm+v+gLt+++vkSHLQkYRl+
  OWM79250.1 211 KQRRCWAPELHRLFVSTLEKLGGPRAATPKLIRELMQVDGLTNDEVKSHLQKYRLH 266
                 79****************************************************97 PP
2Myb_DNA-binding38.23.4e-12213264148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W +e++ l+v   ++lGg+   t+k+I + m+  g+t  ++ks++qky+
       OWM79250.1 213 RRCWAPELHRLFVSTLEKLGGPraaTPKLIRELMQvDGLTNDEVKSHLQKYR 264
                      568************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGELRTFHPS YNFVPTMISD LLKELPSILD AGDRGSWIDE LVKRLQEEMR KIHAFKRELP  60
LSMILLNDAV GALKEEAKCP DSLSIGEPIL AEFIPSRKSS EESGGWKLKN PKDGDLKDKQ  120
NWMTSVQLWN ADHHQNQSEK DEGKAIVPFK GNGHGTVASR KESEEVREEQ SSSGPGSASV  180
PFMRMVSSGR LISVSAPPNS RSARWHEPPR KQRRCWAPEL HRLFVSTLEK LGGPRAATPK  240
LIRELMQVDG LTNDEVKSHL QKYRLHTRRP PNIKGSSSSN QSVVLRDVWM PREGRAIRSQ  300
DLPRVLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.12e-44G2-like family protein