PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79059.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 343aa MW: 38565.3 Da PI: 4.837

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	96	2.5e-30	91	193	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k ltpsdv+k++rlv+pk+ ae++ + ++ l++edesg+ W+++++y+ +s++yvltkGW+++vk+++L++gD+++F++++ + +l+ OWM79059.1 91 FEKPLTPSDVGKLNRLVIPKQQAERYfplggeS--GDKGLLLSFEDESGKCWRFRYSYWSSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRIDMDRLF 187 99*************************9543..346779*********************************************765577779 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ OWM79059.1 188 IGWRRR 193 **9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MSINHFSQDF QETLWWRSQY SQPPVQPHHQ AWLNYPYHSA SSPHSLSFNL NRAGEDDESS 60 ELEEQVIESS ATNNNYMQDL EVTELEKELL FEKPLTPSDV GKLNRLVIPK QQAERYFPLG 120 GESGDKGLLL SFEDESGKCW RFRYSYWSSS QSYVLTKGWS RYVKEKRLDA GDVILFERHR 180 IDMDRLFIGW RRRGAESGQA AQPKGWTGTA AAATSTTRAR GTFYNSYPTH SGGHGPPVST 240 DCTPPAPGST SQNQTIIAPG NSKTLRLFGV NMECQLDESE PSTPDGSSLS SLGLGHQPMY 300 SQSSHYYSPN HHQMMSTTPN TSEIVEDEEE DPEDVTSPNL DLL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MSINHFSQDF QETLWWRSQY SQPPVQPHHQ AWLNYPYHSA SSPHSLSFNL NRAGEDDESS  60
ELEEQVIESS ATNNNYMQDL EVTELEKELL FEKPLTPSDV GKLNRLVIPK QQAERYFPLG  120
GESGDKGLLL SFEDESGKCW RFRYSYWSSS QSYVLTKGWS RYVKEKRLDA GDVILFERHR  180
IDMDRLFIGW RRRGAESGQA AQPKGWTGTA AAATSTTRAR GTFYNSYPTH SGGHGPPVST  240
DCTPPAPGST SQNQTIIAPG NSKTLRLFGV NMECQLDESE PSTPDGSSLS SLGLGHQPMY  300
SQSSHYYSPN HHQMMSTTPN TSEIVEDEEE DPEDVTSPNL DLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.1	5e-60	B3 family protein