PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78883.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 362aa MW: 38760.7 Da PI: 8.7247

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96	2.7e-30	159	212	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl OWM78883.1 159 RPRLVWTPQLHKRFVDAVSHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 212 59*****************.******************************8 PP
2	Myb_DNA-binding	47.1	5.6e-15	161	211	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav lG + +ktI++ m g+t++++ s++qky+ OWM78883.1 161 RLVWTPQLHKRFVDAVSHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 211 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MWNRRRTALG IRAKLNLPTT TIITNSFFPC LLPPDIPKGK QLQNSGTELG TLPKPTEAMR 60 ESDDLANGNN WFSKWEDDLP SPGELMPLSQ SLITHDLALA FDISTNLTLR PSPPQPQPPP 120 RPSTHPPPPP PSTASQPDFA DSSAEMGSGG DEPARTLKRP RLVWTPQLHK RFVDAVSHLG 180 IKNAVPKTIM QLMSVDGLTR ENVASHLQKY RLYLKRMQGN GGSGGGGNGG SGGGGGLSAA 240 GADPATDHLF ASSPVPPHFL HPVRPNSDHC LPFVPVAALQ HHQMAAVAAH PGMQPPYHRL 300 VGQFGSPPNG QFDHSFLSRP GHPVNRFAAT IQNPVQSYAE DLDSASANGG RKVLTLFPAG 360 DD

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MWNRRRTALG IRAKLNLPTT TIITNSFFPC LLPPDIPKGK QLQNSGTELG TLPKPTEAMR  60
ESDDLANGNN WFSKWEDDLP SPGELMPLSQ SLITHDLALA FDISTNLTLR PSPPQPQPPP  120
RPSTHPPPPP PSTASQPDFA DSSAEMGSGG DEPARTLKRP RLVWTPQLHK RFVDAVSHLG  180
IKNAVPKTIM QLMSVDGLTR ENVASHLQKY RLYLKRMQGN GGSGGGGNGG SGGGGGLSAA  240
GADPATDHLF ASSPVPPHFL HPVRPNSDHC LPFVPVAALQ HHQMAAVAAH PGMQPPYHRL  300
VGQFGSPPNG QFDHSFLSRP GHPVNRFAAT IQNPVQSYAE DLDSASANGG RKVLTLFPAG  360
DD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10760.1	2e-87	G2-like family protein