PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM78729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | WRKY | ||||||||
Protein Properties | Length: 259aa MW: 28719.9 Da PI: 5.9194 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.9 | 9.8e-29 | 77 | 134 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY+ +H+h+ OWM78729.1 77 DSWTWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRMDPTTLRITYSYDHEHT 134 99************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MERKSYGNPF VLEHPEDHPD LEPQNGPDPP SSEDETTRIG APSPKKRKGI QKRVVSIPID 60 RDVNGARSKG EAYPPPDSWT WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRMDP 120 TTLRITYSYD HEHTSPAQGH SPAISPVAND PPQTEVSLDL SGFTGHPDLR CDAPLDLDWL 180 AADVASTSLM ENPVWTAGYC NELGADLAVG YDMMREEDET LFADLGELPE CTTVFGRKEV 240 DRTRRSRRLS AVPHAGSIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 2e-57 | WRKY family protein |