PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78674.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HB-other

Protein Properties

Length: 1667aa MW: 186868 Da PI: 5.1341

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	22	78	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t++ql++Le+ ++ ++yp +++r+eL+++lgL++rq ++WF+ rR k++k OWM78674.1 22 KSKRKMKTASQLQILEKTYAVEQYPPEAMRAELSAQLGLSDRQLQMWFCHRRLKDRK 78 679****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1667 aa Download sequence
MEGGSEVEKV KPPEGGGGGE GKSKRKMKTA SQLQILEKTY AVEQYPPEAM RAELSAQLGL 60 SDRQLQMWFC HRRLKDRKAR QPKDTPAAAP SPEVVATAAG PDVASGPIPG TVAGPGSFPH 120 PAVDPSRAAP RVGTAVARIS RDFPPVKRYY EPQLSMLERR AIASVEAQLG EPLRDDGPIL 180 GMEFDSLPPD AFGAPIGGHH KPSRRIFQSK YERPDAKLIK DVRPVQEYQF LPEKPTVRSE 240 MHERAEASYN ILQVNEQVPP ENTLQGQLPT LNLLATPPGR QGQPWTSGLT EYAADPRKNS 300 FMDVEVHGVH PAMVMDPLTS SERRIAHNEE VLRTERKRKS EEARIARELE AHEKRIRKEL 360 KRQDILRRKA MIYTIYGREE QIRKEMERHD RERRKEEERL LREKQREEER YLREQRRELE 420 RREKYLQKES MRAEKMRQKE EVRRMKEAAR LKAASERAIA RRIAKESMEL MEDGKLELME 480 VAASSKGLPS IASLDYETLQ NLDLFGDLLT AFPPKSVPLR RPFAVQPWLH SEENVANLLM 540 DARLLSEIHI SLLKTIIKDI EDVARASSMG LGANQNGAAN PGGGHPHLVE GAYAWGFDIR 600 SWQRHLNPLT WPEILRQFAL SAGFGPQLKK KDIESAHLND DNTEVNNGEN VISILRDGTA 660 AENAFAKMQE RGYSSLRRSR HRLTPGTVKF AAFHVLSVEG SDGLNILEVA ERIQKSGLRD 720 LSTSKTPEAS IAAALSRDTK LFERTAPSTY CVRATYRKDP VDAEAVLSAA RERIRTFKSG 780 MMEGEEEADD AERDEDSESD SGEDPEVDDL GTESNLDKEV HQKVGNRLNL RESLGNGIES 840 NEIRLTQVEI PQSGLKDASG VSTMAHSPDL CRERGTIDDA DINDEGIENN LDEQETDIDG 900 SIPVESWVEG LMEGEYSDLS VEERLGALVA LIGVAIEGNT IRLVLEERLE AATALKKQMW 960 AEAQLDKRRF REDYVMKTYY PSQTSLSASG KQSPAPVADD GRNCMPVDPS MQQEQMIHRP 1020 TEENLQILDN FGGPEVLSLA QAGYAAERSR SQLKSYIGYK AEEMYVYRSL PLGQDRRRNR 1080 YWRFATSASR NDPGCGRIFV ELRDGQWRLI DSEEGFDALL AVLDVRGIRE ANLYSMLRKI 1140 EPLFKEIVRR NFLDTKVKKQ SEESPSSTVE SLHSDASEAS TSFLIELPGE RNGALKRYQE 1200 FENWMWRECL SSSVLCAAKF GNKRCVELLR GCVRCHEVFA FEEENCPSCH KNGGTSTRDA 1260 HFLNHRVKRE EKLSTIPASD FNSCGPVSSP VRIRSLEASI PSEAIADVWT DFSRKFWGAE 1320 LSSSSSAGDL LQALTLLESA IKRDYLSSKF ETTTEVLGLS SPINVFSVNK NVPLLPWVPK 1380 TTAAVALRLM ELDSAISYTL NQKAESERDE GVQEHSKLSL RYALPSQGIA ETSYRNDPFG 1440 EESWVDSGGL LGSSSRGRGT RGRTRARATG LRSQRRTVGS RSVTRKRSEK SGDVVALRGR 1500 PRGRGGRKRG RSARNRQKAP IKATQRDVSP EKVKPAQFSA VDNAWNDDEN ELLPLEESEN 1560 SSSSERFDYG EENGQDMGYE YDDAMVDNYH GGFGGKSDDL MEGNEFEEEE EDEDEELGVE 1620 GYVDGQESDE VGMRRGDAFG IQNMGPEEDA AAYTSSDDYS DEDEDDS

Sequence ? help Back to Top

Protein Sequence Length: 1667 aa Download sequence

MEGGSEVEKV KPPEGGGGGE GKSKRKMKTA SQLQILEKTY AVEQYPPEAM RAELSAQLGL  60
SDRQLQMWFC HRRLKDRKAR QPKDTPAAAP SPEVVATAAG PDVASGPIPG TVAGPGSFPH  120
PAVDPSRAAP RVGTAVARIS RDFPPVKRYY EPQLSMLERR AIASVEAQLG EPLRDDGPIL  180
GMEFDSLPPD AFGAPIGGHH KPSRRIFQSK YERPDAKLIK DVRPVQEYQF LPEKPTVRSE  240
MHERAEASYN ILQVNEQVPP ENTLQGQLPT LNLLATPPGR QGQPWTSGLT EYAADPRKNS  300
FMDVEVHGVH PAMVMDPLTS SERRIAHNEE VLRTERKRKS EEARIARELE AHEKRIRKEL  360
KRQDILRRKA MIYTIYGREE QIRKEMERHD RERRKEEERL LREKQREEER YLREQRRELE  420
RREKYLQKES MRAEKMRQKE EVRRMKEAAR LKAASERAIA RRIAKESMEL MEDGKLELME  480
VAASSKGLPS IASLDYETLQ NLDLFGDLLT AFPPKSVPLR RPFAVQPWLH SEENVANLLM  540
DARLLSEIHI SLLKTIIKDI EDVARASSMG LGANQNGAAN PGGGHPHLVE GAYAWGFDIR  600
SWQRHLNPLT WPEILRQFAL SAGFGPQLKK KDIESAHLND DNTEVNNGEN VISILRDGTA  660
AENAFAKMQE RGYSSLRRSR HRLTPGTVKF AAFHVLSVEG SDGLNILEVA ERIQKSGLRD  720
LSTSKTPEAS IAAALSRDTK LFERTAPSTY CVRATYRKDP VDAEAVLSAA RERIRTFKSG  780
MMEGEEEADD AERDEDSESD SGEDPEVDDL GTESNLDKEV HQKVGNRLNL RESLGNGIES  840
NEIRLTQVEI PQSGLKDASG VSTMAHSPDL CRERGTIDDA DINDEGIENN LDEQETDIDG  900
SIPVESWVEG LMEGEYSDLS VEERLGALVA LIGVAIEGNT IRLVLEERLE AATALKKQMW  960
AEAQLDKRRF REDYVMKTYY PSQTSLSASG KQSPAPVADD GRNCMPVDPS MQQEQMIHRP  1020
TEENLQILDN FGGPEVLSLA QAGYAAERSR SQLKSYIGYK AEEMYVYRSL PLGQDRRRNR  1080
YWRFATSASR NDPGCGRIFV ELRDGQWRLI DSEEGFDALL AVLDVRGIRE ANLYSMLRKI  1140
EPLFKEIVRR NFLDTKVKKQ SEESPSSTVE SLHSDASEAS TSFLIELPGE RNGALKRYQE  1200
FENWMWRECL SSSVLCAAKF GNKRCVELLR GCVRCHEVFA FEEENCPSCH KNGGTSTRDA  1260
HFLNHRVKRE EKLSTIPASD FNSCGPVSSP VRIRSLEASI PSEAIADVWT DFSRKFWGAE  1320
LSSSSSAGDL LQALTLLESA IKRDYLSSKF ETTTEVLGLS SPINVFSVNK NVPLLPWVPK  1380
TTAAVALRLM ELDSAISYTL NQKAESERDE GVQEHSKLSL RYALPSQGIA ETSYRNDPFG  1440
EESWVDSGGL LGSSSRGRGT RGRTRARATG LRSQRRTVGS RSVTRKRSEK SGDVVALRGR  1500
PRGRGGRKRG RSARNRQKAP IKATQRDVSP EKVKPAQFSA VDNAWNDDEN ELLPLEESEN  1560
SSSSERFDYG EENGQDMGYE YDDAMVDNYH GGFGGKSDDL MEGNEFEEEE EDEDEELGVE  1620
GYVDGQESDE VGMRRGDAFG IQNMGPEEDA AAYTSSDDYS DEDEDDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein