PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78638.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 423aa    MW: 46913.9 Da    PI: 5.2721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-19205255256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  OWM78638.1 205 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 255
                 59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MAAAKNTGIS NKGVDQKLET GAGQDWERNR AQGLDFSSET QPWRLPVFSE ASSSNRPLKK  60
LRSPERQREP VHSFPFPPHH SSAPMVSSQS AGPVLPSSRL IFPFAVDGSQ QHVQYQYPHQ  120
FRSAPVQPAQ PNQQHMISFG SQQQQQQQQM NVNYMPYPTG NLQQQQQLLQ YYSEALNLSP  180
RGRMMMMNRF SRPQGPLQPI NTTKLYRGVR QRHWGKWVAE IRLPRNRTRL WLGTFDTAED  240
AAMAYDREAF KLRGENARLN FPELFLNKDR PEAESSVPSS STSPPPAPAE NTIANSPEED  300
PSELPVQPTD GNPDGTESGV TECELTAAIG DSGGVSSGSQ EMVWGEEMAE AWFNSIPAGW  360
GPGSPVWDDL DTTNNILLQS RLPFSGLNQQ EFLDTDFQGD NSAPASASAS SSSSSSCPMR  420
PFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28140.11e-57ERF family protein