PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM78583.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27510.1 Da PI: 5.7787 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.0005 | 102 | 138 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 i+ +f eL ++l + + +K +Ka iL Av+ + +L OWM78583.1 102 SIKLRFLELTSILEPG---KPPKTDKAVILSDAVRTVTQL 138 68999**********9...99*************988887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEIDSMDGSN WLADYGYVED EVDFFQPSSG FASWASPAFG CSSDLSVEVN YSFTDSDSLK 60 MPSCRKRLKP DSCNALGSKA GREKTRRDKL NERHELSHEL ISIKLRFLEL TSILEPGKPP 120 KTDKAVILSD AVRTVTQLRA ETEELKESNG QLQEKIKELK AEKNELRDEK QRLKADKEKL 180 EQQVKAMSVQ MSYLPHLSAM FAAQGQATSN KLMPYIGFPG AAMWQFMSPS VIDTSQDHVQ 240 RPPAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 8e-76 | bHLH family protein |