PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78432.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 475aa    MW: 53741.7 Da    PI: 6.1532
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS456.71.4e-139464701374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++ Ll cA++v+s++  +a+ +L+r+s +aspdgd+mqR+aayfteALa r+++++++l kal++++ +  + +e++ ++klf+e++P+lk+s+l++N
  OWM78432.1  46 LIHHLLVCANHVASSSIDNANLALERISLHASPDGDAMQRIAAYFTEALADRILKNWPGLHKALNSTKIT--SITERILVQKLFFELCPFLKLSYLITN 142
                 6899************************************************************999998..59************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea+ege++vHiiD+ + +++QW++Llq+L++Rpegpp+lRiTg+++    +ke le+++ rL++ Ae+l++pf+fn+ ++ +le+l++e+Lrvk+
  OWM78432.1 143 QAILEAMEGEKMVHIIDLYAFEPAQWINLLQSLSTRPEGPPHLRITGIHE----QKEVLEQMAFRLTEEAEKLDIPFQFNP-IVCTLENLDVESLRVKT 236
                 **************************************************....9**************************.6889************* PP

        GRAS 199 gEalaVnlvlqlhrll........................................................desvsles..erdevLklvkslsPkvv 239
                 gEala+++vlqlh+ll                                                        ++++sl+   +  ++L ++++lsPk++
  OWM78432.1 237 GEALAISSVLQLHSLLaiddemqkrssppsaskslnsnnlqrvlhmkqrtlgewlekdliniyspspdsasaSSPLSLNAspKMGSFLTALWGLSPKLM 335
                 **********************************************************************9955555554456778************* PP

        GRAS 240 vvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
                 v++eqe++ n++ ++er+leal++y+a+fd+le+++pr+s er+ vE++l+g+ei+n++aceg +rrerhe+lekW+ rle aGF+ v ls++ + qa 
  OWM78432.1 336 VITEQESNQNGSGLMERVLEALNFYAAMFDCLESTIPRASVERQRVEKMLFGEEIKNIIACEGVKRRERHEKLEKWSLRLELAGFGRVYLSYSGMLQAG 434
                 *************************************************************************************************** PP

        GRAS 339 lllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +ll+ +++dgy+++ee+g+++l+W++rp++svSaWr
  OWM78432.1 435 RLLQSYGFDGYNIKEENGCFFLCWQERPMFSVSAWR 470
                 ***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MVQDEGSSSV TSSPLQYFSL MSLSPGIGSP YPWLKELKSE DRGLYLIHHL LVCANHVASS  60
SIDNANLALE RISLHASPDG DAMQRIAAYF TEALADRILK NWPGLHKALN STKITSITER  120
ILVQKLFFEL CPFLKLSYLI TNQAILEAME GEKMVHIIDL YAFEPAQWIN LLQSLSTRPE  180
GPPHLRITGI HEQKEVLEQM AFRLTEEAEK LDIPFQFNPI VCTLENLDVE SLRVKTGEAL  240
AISSVLQLHS LLAIDDEMQK RSSPPSASKS LNSNNLQRVL HMKQRTLGEW LEKDLINIYS  300
PSPDSASASS PLSLNASPKM GSFLTALWGL SPKLMVITEQ ESNQNGSGLM ERVLEALNFY  360
AAMFDCLEST IPRASVERQR VEKMLFGEEI KNIIACEGVK RRERHEKLEK WSLRLELAGF  420
GRVYLSYSGM LQAGRLLQSY GFDGYNIKEE NGCFFLCWQE RPMFSVSAWR FRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein