PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78141.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 335aa MW: 36032.9 Da PI: 6.957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00038	229	267	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq OWM78141.1 229 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 267 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MMAGNPNWWN MNIPPPPPPP PPSSSPSPPP PLSHALFQYP HPHHQYGFGS SPSHPLSSFV 60 ADNSSHDQLP PQSWSQLLLG GLSGEEADSY KSGPSFYQTR KFGNWPVVED QSILSREPSP 120 GLHVKQEQVA QHGNPYIQHE ELPAGHKPAT VWPTAHMIPV SSPGSCVTTL SSSTNSVLDF 180 SSNISKGDHG SRNNQNLDHS SSECNSTATV GACKKARVQS GSNQPLKVRK EKLGDRITAL 240 HQLVSPFGKT DTASVLLEAI GYIRFLQSQI EALSSPYLGN ASGNLNHQHS ENDGNNLPKD 300 LRSRGLCLVP VSCTMQVGND NGADYWAPAA FGGSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	3e-50	bHLH family protein