PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78012.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HB-other
Protein Properties Length: 394aa    MW: 43554.9 Da    PI: 9.5689
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox16.71.3e-0569124156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +r+R  ++++ ++ ++++F+ +  +s++e +e++++ g++ +qV+ +F  + ++ +
  OWM78012.1  69 KRPRDLLNPKAVKYMQSVFAIKDAISKKESREISARFGVKVTQVRDFFASQQTRVR 124
                 799*******************************************9988777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MEVPTEESLE QEIAHSPASF LKFLESQREL LHSQIDQLQN VVVTQCKLTG VNPLSQEMAA  60
GALSIKIGKR PRDLLNPKAV KYMQSVFAIK DAISKKESRE ISARFGVKVT QVRDFFASQQ  120
TRVRRFVRLS REKALRSEAL KNASDNVPSN SEPLASINPV PLSAVGPSNV EEVPSCPSQN  180
DTLSDIDELD KHFVNNIFSL MGKEETFSGQ VKLMKWILTI QSTAVLSWFL TKGGAMIIAT  240
WLSQAATEEQ TSVLFVILEV LSHLPIHEAV PAHVSAILQS VNSLRFYRTS DVSNRAKALL  300
AKWSKMFVRA QALKKPNGMK SSDAVLKERA WKQSLSEIMG EEALQSNANV SEGILAPYEG  360
SENTRKSESS QPLKLLTASA DDSSRKGLSS FRIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.21e-145HB-other family protein