PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM78005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | NF-YB | ||||||||
Protein Properties | Length: 188aa MW: 20814 Da PI: 5.4078 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 174.7 | 9.5e-55 | 32 | 127 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easd+cq+ekrkt+ngdd++wal lGf+dyveplk yl++yre+egek OWM78005.1 32 REQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDRCQKEKRKTVNGDDICWALRALGFDDYVEPLKRYLNRYREFEGEK 127 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MVDNNFSSNI ISPSDTKCSS FTETADSSGI IREQDRLLPI ANVGRIMKQI LPPNAKISKE 60 AKETMQECVS EFISFVTGEA SDRCQKEKRK TVNGDDICWA LRALGFDDYV EPLKRYLNRY 120 REFEGEKAAS NSHNKGGSSS TNNIDSNDGI NYSGGSSGRV CENEDQAPMF LKFNVGERSN 180 SGSLSRRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 6e-62 | NF-YB family protein |