PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77561.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 372aa    MW: 41221.1 Da    PI: 5.2023
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.6e-09245289655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + + r RR+ri ++ +eL +l+P        K++ ae+L+ A +Y+k Lq
  OWM77561.1 245 SLAARERRKRISDKTQELGKLIPGG-----SKMNTAEMLQSAFNYVKFLQ 289
                 56679******************95.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MALSSYPALN WPVVHDHFHG FIPIPPAAAT EAPHQLEMPA SAAAFPSYSN NAGAALSVVY  60
NNRHSDVVKA DPLFFNKGYF DYGITGDAQP ADDYSCISSS YPDCYNYYSN YSTVDDLLDP  120
AETYFSSPAA DPLSLAGCYD MNYGDYHLQQ QLLSGPGILG LHDYNEDAYA DQFYQRQLPA  180
AQPPKRHRPC YFDLPGNLLF PPGDTCPPAQ LPVLHAIDGV SSNMTKAEEY IEHTRPRPRR  240
VSAQSLAARE RRKRISDKTQ ELGKLIPGGS KMNTAEMLQS AFNYVKFLQS QVQILQLMAS  300
SNPSQEDDLA EKPEKEEDEA EKGSSSPSLL RLVASPTVQE KLYKEESCII PRSLAKALVH  360
SHPHLPDLHQ LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-22bHLH family protein